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Protein
Submitted name:

Ovo-like 1(Drosophila) (Predicted)

Gene

Ovol1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Ovo-like 1(Drosophila) (Predicted)Imported
Submitted name:
Ovo-like transcriptional repressor 1Imported
Gene namesi
Name:Ovol1Imported
Synonyms:Ovol1_predictedImported
ORF Names:rCG_47608Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1306956 Ovol1

Expressioni

Gene expression databases

BgeeiENSRNOG00000020669 Expressed in 9 organ(s), highest expression level in colon
ExpressionAtlasiD4A445 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028081

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini118 – 145C2H2-typeInterPro annotationAdd BLAST28
Domaini146 – 173C2H2-typeInterPro annotationAdd BLAST28
Domaini174 – 202C2H2-typeInterPro annotationAdd BLAST29
Domaini213 – 240C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG3576 Eukaryota
ENOG4111H28 LUCA
GeneTreeiENSGT00920000149010
KOiK09216
OMAiQPYQEPE
OrthoDBiEOG091G0LB1
TreeFamiTF337552

Family and domain databases

InterProiView protein in InterPro
IPR027756 Ovo-like
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR10032 PTHR10032, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D4A445-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPRAFLVKKP CVSTCKRNWS ELPDEERGEI YVPVSLGFCP PQPYLEPEAS
60 70 80 90 100
VAEPPSCPLA LDMSLRDSSY GVASGPCEVA QLPPEDVNHL TDPQSRDQGF
110 120 130 140 150
LRTKMKVTLG DSPNGDLFTC HICQKSFTYQ RMLNRHMKCH NDVKRHLCTY
160 170 180 190 200
CGKGFNDTFD LKRHVRTHTG VRPYKCSLCD KAFTQRCSLE SHLKKIHGVQ
210 220 230 240 250
QKYAYKERRA KLYVCEECGC TSESQEGHVL HLKEHHPDSP LLRKTSKKVA
260
VALQNTVTSL LQGSPHL
Length:267
Mass (Da):30,213
Last modified:April 20, 2010 - v1
Checksum:i3FE352797E1DD159
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2JZM1A0A0G2JZM1_RAT
Ovo-like transcriptional repressor ...
Ovol1
267Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109096 Genomic DNA No translation available.
CH473953 Genomic DNA Translation: EDM12506.1
RefSeqiNP_001101042.1, NM_001107572.1
UniGeneiRn.53479

Genome annotation databases

EnsembliENSRNOT00000028081; ENSRNOP00000028081; ENSRNOG00000020669
GeneIDi309164
KEGGirno:309164
UCSCiRGD:1306956 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC109096 Genomic DNA No translation available.
CH473953 Genomic DNA Translation: EDM12506.1
RefSeqiNP_001101042.1, NM_001107572.1
UniGeneiRn.53479

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028081

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000028081; ENSRNOP00000028081; ENSRNOG00000020669
GeneIDi309164
KEGGirno:309164
UCSCiRGD:1306956 rat

Organism-specific databases

CTDi5017
RGDi1306956 Ovol1

Phylogenomic databases

eggNOGiKOG3576 Eukaryota
ENOG4111H28 LUCA
GeneTreeiENSGT00920000149010
KOiK09216
OMAiQPYQEPE
OrthoDBiEOG091G0LB1
TreeFamiTF337552

Gene expression databases

BgeeiENSRNOG00000020669 Expressed in 9 organ(s), highest expression level in colon
ExpressionAtlasiD4A445 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR027756 Ovo-like
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR10032 PTHR10032, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 4 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD4A445_RAT
AccessioniPrimary (citable) accession number: D4A445
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 10, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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