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Protein
Submitted name:

GATA zinc finger domain-containing 1

Gene

Gatad1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GATA zinc finger domain-containing 1Imported
Submitted name:
Similar to ODAG protein, isoform CRA_bImported
Gene namesi
Name:Gatad1Imported
Synonyms:LOC500005Imported
ORF Names:rCG_41029Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1562004 Gatad1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000008613 Expressed in 10 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011666

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 33GATA-typeInterPro annotationAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410IGNZ Eukaryota
ENOG410XR16 LUCA
GeneTreeiENSGT00390000018554
OMAiYIVGPEE
OrthoDBiEOG091G0KSX

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR039050 GATAD1
IPR000679 Znf_GATA
IPR013088 Znf_NHR/GATA
PANTHERiPTHR13340 PTHR13340, 1 hit
PROSITEiView protein in PROSITE
PS50114 GATA_ZN_FINGER_2, 1 hit

Sequencei

Sequence statusi: Complete.

D4A3T2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPLGLKPTCS MCKTTSSSMW KKSPQGEILC HHCTGRGGGG GGAGVAGGTG
60 70 80 90 100
GGGGFGTATF ATTSAGPSQS NGGGGGKQSK QEIHRRSARL RNTKYKSAPA
110 120 130 140 150
AEKKVSTKGK GRRHIFKLKN PIKAPESVST IVTAESIFYK GVYYQIGDVV
160 170 180 190 200
SVIDEQDGKP YYAQIRGFIQ DQYCEKSAAL TWLIPTLASP RDQFDPASYI
210 220 230 240 250
IGPEEDLPRK MEYLEFVCHA PSEYFKSRSS PFPTVPTRPE KGYIWTHVGP
260
TPAITMKETV ANHL
Length:264
Mass (Da):28,409
Last modified:April 20, 2010 - v1
Checksum:iEC44A0ABC5B53A3D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07059622 Genomic DNA No translation available.
CH474013 Genomic DNA Translation: EDL84366.1
RefSeqiXP_001068512.2, XM_001068512.4
XP_575359.3, XM_575359.5
UniGeneiRn.203407

Genome annotation databases

EnsembliENSRNOT00000067376; ENSRNOP00000060484; ENSRNOG00000008613
GeneIDi500005
KEGGirno:500005

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07059622 Genomic DNA No translation available.
CH474013 Genomic DNA Translation: EDL84366.1
RefSeqiXP_001068512.2, XM_001068512.4
XP_575359.3, XM_575359.5
UniGeneiRn.203407

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000011666

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000067376; ENSRNOP00000060484; ENSRNOG00000008613
GeneIDi500005
KEGGirno:500005

Organism-specific databases

CTDi57798
RGDi1562004 Gatad1

Phylogenomic databases

eggNOGiENOG410IGNZ Eukaryota
ENOG410XR16 LUCA
GeneTreeiENSGT00390000018554
OMAiYIVGPEE
OrthoDBiEOG091G0KSX

Gene expression databases

BgeeiENSRNOG00000008613 Expressed in 10 organ(s), highest expression level in testis

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR039050 GATAD1
IPR000679 Znf_GATA
IPR013088 Znf_NHR/GATA
PANTHERiPTHR13340 PTHR13340, 1 hit
PROSITEiView protein in PROSITE
PS50114 GATA_ZN_FINGER_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD4A3T2_RAT
AccessioniPrimary (citable) accession number: D4A3T2
Secondary accession number(s): D3ZHD5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 58 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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