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Protein
Submitted name:

Zinc finger and BTB domain-containing 40

Gene

Zbtb40

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and BTB domain-containing 40Imported
Gene namesi
Name:Zbtb40Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1309866 Zbtb40

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD4A365
PRIDEiD4A365

Expressioni

Gene expression databases

BgeeiENSRNOG00000022039 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000035665

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 87BTBInterPro annotationAdd BLAST64
Domaini822 – 850C2H2-typeInterPro annotationAdd BLAST29
Domaini851 – 878C2H2-typeInterPro annotationAdd BLAST28
Domaini879 – 907C2H2-typeInterPro annotationAdd BLAST29
Domaini908 – 935C2H2-typeInterPro annotationAdd BLAST28
Domaini936 – 964C2H2-typeInterPro annotationAdd BLAST29
Domaini965 – 993C2H2-typeInterPro annotationAdd BLAST29
Domaini993 – 1020C2H2-typeInterPro annotationAdd BLAST28
Domaini1021 – 1043C2H2-typeInterPro annotationAdd BLAST23
Domaini1061 – 1089C2H2-typeInterPro annotationAdd BLAST29
Domaini1090 – 1118C2H2-typeInterPro annotationAdd BLAST29
Domaini1150 – 1173C2H2-typeInterPro annotationAdd BLAST24

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili705 – 725Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000151052
InParanoidiD4A365
OMAiIFTDNQM
OrthoDBiEOG091G00OM
TreeFamiTF350897

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR030404 ZBTB40
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR24394:SF0 PTHR24394:SF0, 1 hit
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 5 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 11 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits

Sequencei

Sequence statusi: Complete.

D4A365-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MELPNYSQQL LLQLYALCKE QRFCDCTISI GNIYFRAHKP VLAAASLLFK
60 70 80 90 100
TLLDSTDAIS IDASVVSPEE FALLLEMTYT GKLPVGKHNF SKIISLADSL
110 120 130 140 150
QMFDVAVCCK NLLTNLVNCS VQGQVVRDIS VLSSEAGGKE SEKPQVEVLS
160 170 180 190 200
SEGAGEPSSS LEVSAMPAGT EKAKTQEVIH MVTQEISADP PIAQEVQVAA
210 220 230 240 250
EITGATPHTT EVCSPLPAGQ IPSEAKAAST EAGCERKQDQ LTLLLEYESV
260 270 280 290 300
FSSAALLTPD MLRRLEGCSE IEGPQKETVM ECLEAEGGGS AFQRILDKVH
310 320 330 340 350
DGSLDVQVAL SLMRLCQEST PAEKVSQIEG SAGEGKTLSV LLLEHKEDLI
360 370 380 390 400
QCVTQLRPIV EFLETAKEEF LPDSEKRVIQ ICCEGRTPKE TVENLLHRVT
410 420 430 440 450
EEKTLPAKSL VKLLQAVRTA FPNLGLLLEN LQKVAESPGT TGLTRATRET
460 470 480 490 500
AWTEEPKRLC IPADRVDGSS PNPDAYGAEL LRKYHENLSE ILIDSQVLLK
510 520 530 540 550
VISRLKSLAP GDREVMQTLV KQDSGSGGVS SLMSAALERQ TVSAAAIWQL
560 570 580 590 600
LLAAQETETC PLNLLLEEVE REPGAGAFFR AVTAPESTVL ETILRHSKLV
610 620 630 640 650
REAIQQTVGR EHLSSEEEHL AETVKEMLSI SSETVSPEAS LRVVLSRAME
660 670 680 690 700
KSVSASVVCH LLCSVHRSFP GLQPLMQELA HVGFLTKENA EERWKVTDGL
710 720 730 740 750
HPGAKDKTEE AAEAAREDGR AMEQKEQGPE PVPERQEKDT SASPDAAKKS
760 770 780 790 800
FVCKACDKSF HFYCRLKVHM KRCRVAKSKQ AQGKGDSDTR DSEKELGRQQ
810 820 830 840 850
PEARSAGAEP DAPKKKKKRL PVTCDLCGRE FAHASGMQYH KLTEHFDEKP
860 870 880 890 900
FSCEECGAKF AANSTLKNHL RLHTGDRPFM CKHCLMTFTQ ASALAYHTKK
910 920 930 940 950
KHSEGKMYAC QYCDAVFAQS IELSRHVRTH TGDKPYVCRD CGKGFRQANG
960 970 980 990 1000
LSIHLHTFHN IEDPYDCKKC RMSFSTLQDH RKHIHDVHSK EYHPCPTCGK
1010 1020 1030 1040 1050
IFSAPSMLER HMVTHVGGKP FSCGICNKAY QQLSGLWYHN RTHHPDVFAA
1060 1070 1080 1090 1100
QNHRSPKFSS LQCSSCDKTF SNTIEHKKHI KTEHADLKFH ECGQCKELFP
1110 1120 1130 1140 1150
TPALLQVHVK CQHSGSQPFR CLYCAATFRF PGALQHHVTT EHFKQSESTF
1160 1170 1180 1190 1200
PCELCGELFT SQAQLDGHLE SEHPKVTGTE TQAAASRMVQ VIQAPEPAAP
1210 1220 1230 1240 1250
AEQVITLEET QLAGSQVFVT LPDPQTSQNS SELVAVTVED LLDGTVTLIC

GEAK
Length:1,254
Mass (Da):138,143
Last modified:July 22, 2015 - v3
Checksum:i0C61F62FCD12D5BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094067 Genomic DNA No translation available.
RefSeqiXP_006239294.1, XM_006239232.3
UniGeneiRn.160688

Genome annotation databases

EnsembliENSRNOT00000033670; ENSRNOP00000035665; ENSRNOG00000022039
GeneIDi362635
UCSCiRGD:1309866 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC094067 Genomic DNA No translation available.
RefSeqiXP_006239294.1, XM_006239232.3
UniGeneiRn.160688

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000035665

Proteomic databases

PaxDbiD4A365
PRIDEiD4A365

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000033670; ENSRNOP00000035665; ENSRNOG00000022039
GeneIDi362635
UCSCiRGD:1309866 rat

Organism-specific databases

CTDi9923
RGDi1309866 Zbtb40

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00930000151052
InParanoidiD4A365
OMAiIFTDNQM
OrthoDBiEOG091G00OM
TreeFamiTF350897

Gene expression databases

BgeeiENSRNOG00000022039 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR030404 ZBTB40
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR24394:SF0 PTHR24394:SF0, 1 hit
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 5 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 11 hits
PS50157 ZINC_FINGER_C2H2_2, 11 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD4A365_RAT
AccessioniPrimary (citable) accession number: D4A365
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: November 7, 2018
This is version 66 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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