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Protein
Submitted name:

GLIS family zinc finger 3

Gene

Glis3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GLIS family zinc finger 3Imported
Gene namesi
Name:Glis3Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD4A314
PRIDEiD4A314

Expressioni

Gene expression databases

BgeeiENSRNOG00000014768 Expressed in 9 organ(s), highest expression level in adult mammalian kidney

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019816

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini500 – 530C2H2-typeInterPro annotationAdd BLAST31
Domaini539 – 566C2H2-typeInterPro annotationAdd BLAST28
Domaini567 – 596C2H2-typeInterPro annotationAdd BLAST30
Domaini597 – 626C2H2-typeInterPro annotationAdd BLAST30
Domaini627 – 656C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
InParanoidiD4A314
OMAiHIQGFYG
OrthoDBiEOG091G0IZP
TreeFamiTF350216

Family and domain databases

InterProiView protein in InterPro
IPR030405 GLIS3
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR19818:SF123 PTHR19818:SF123, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits

Sequencei

Sequence statusi: Complete.

D4A314-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNERSCGMNL HRTSRTPQRP GLLSGQHVLP ARAHSGTPCS SSCASTPSPT
60 70 80 90 100
LGSLANSLHL KMSSGAGMAP QSNMAASPIH LPALSPRRQL LANGKPQFQV
110 120 130 140 150
TQAGVMAASH TLKPKQQEFG DPFSPNPEKG ALGFGPQCKS IGKGSCNNLV
160 170 180 190 200
VTSSPMMVQR LGPISPPASQ VSTACKQISP SLPRAVNAVN LNRPPSDTRS
210 220 230 240 250
VILQESLVST TLSLTESQSA LSVKQEWSQS YRGFPSLSSN HSSQNGMDLG
260 270 280 290 300
DLLSLPPGTP VSGNSVSNSL PPYLFGMENS HSPYPSPRHS ATRPHSTRSK
310 320 330 340 350
KRALSLSPLS DGIGIDFNTI IRTSPTSLVA YINGSRASPA NMSPQSEVYG
360 370 380 390 400
HFLGVRGSCI PQSCAVSSGQ KGVLVTSGGH TLPGYGEDGT LEYERMQQLE
410 420 430 440 450
HGGLQPGSGN SMVLQPGLPG QDGQTANMLK TERLEEFPAS ALDLPSAPPL
460 470 480 490 500
PLPPPQGPPP PYHAHPHLHH PELLPHTQSL PLAQAGLEED GELEDSGGKH
510 520 530 540 550
CCRWIDCSAL YDQQEELVRH IEKVHIDQRK GEDFTCFWTG CPRRYKPFNA
560 570 580 590 600
RYKLLIHMRV HSGEKPNKCT FEGCKKAFSR LENLKIHLRS HTGEKPYLCQ
610 620 630 640 650
HPGCQKAFSN SSDRAKHQRT HLDTKPYACQ IPGCTKRYTD PSSLRKHVKA
660 670 680 690 700
HSSKEQQARK KLRSSTELHP DLLTDCLAVQ PLQPATSPRD AADRTVGHSP
710 720 730 740 750
GPGPGPGFGX QLISAPIFAS NHSTRSGTAA GAVPPPHPVS HPSPGHNVQG
760 770 780 790 800
SPHNPSSHLP PLTAVDAGTE RFAPPTPSPH HISPGRVPAP QSLLQRAQAP
810 820 830 840 850
HTQQPPGSLL KPYQPETNSS FQSNGIHVHG FYGQLQTFCP PNYPDSQRSV
860 870 880 890 900
PSSSSCSMVP SFEDCLVPTS MGQAGFDVFH RALSTHSGIT VYDLPSASSS
910 920 930
LFGESLRSGP EDPTFLQLSA VDRCPSQLSS VYTEG
Length:935
Mass (Da):100,128
Last modified:July 22, 2015 - v3
Checksum:iB389B3FF9FA37DEB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07006682 Genomic DNA No translation available.
AABR07006683 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000019816; ENSRNOP00000019816; ENSRNOG00000014768

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07006682 Genomic DNA No translation available.
AABR07006683 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000019816

Proteomic databases

PaxDbiD4A314
PRIDEiD4A314

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000019816; ENSRNOP00000019816; ENSRNOG00000014768

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
InParanoidiD4A314
OMAiHIQGFYG
OrthoDBiEOG091G0IZP
TreeFamiTF350216

Gene expression databases

BgeeiENSRNOG00000014768 Expressed in 9 organ(s), highest expression level in adult mammalian kidney

Family and domain databases

InterProiView protein in InterPro
IPR030405 GLIS3
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR19818:SF123 PTHR19818:SF123, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 3 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD4A314_RAT
AccessioniPrimary (citable) accession number: D4A314
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: November 7, 2018
This is version 64 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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