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Protein
Submitted name:

Zinc finger protein 580

Gene

Zfp580

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein 580Imported
Gene namesi
Name:Zfp580Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1306892 Zfp580

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD4A235
PRIDEiD4A235

Expressioni

Gene expression databases

BgeeiENSRNOG00000016274 Expressed in 10 organ(s), highest expression level in brain
GenevisibleiD4A235 RN

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000021772

Structurei

3D structure databases

ProteinModelPortaliD4A235
SMRiD4A235
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini92 – 119C2H2-typeInterPro annotationAdd BLAST28
Domaini120 – 147C2H2-typeInterPro annotationAdd BLAST28
Domaini150 – 172C2H2-typeInterPro annotationAdd BLAST23

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00920000149029
InParanoidiD4A235
OMAiQSHRISH
OrthoDBiEOG091G0STS
PhylomeDBiD4A235
TreeFamiTF338348

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

D4A235-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLLLPPRPPH PRSSSPEVMD PPPPKTPPFP KAEGPSSTSS SVAGPRPPRL
60 70 80 90 100
GRHLLIDANG VPYTYTVQLE EEPRGPPQRE ATPGEPGPRK GYSCPECARV
110 120 130 140 150
FASPLRLQSH RVSHSDLKPF TCGACGKAFK RSSHLSRHRA THRARAGPPH
160 170
TCPLCPRRFQ DAAELAQHVR LH
Length:172
Mass (Da):18,837
Last modified:April 20, 2010 - v1
Checksum:i885238D4EB35CCAE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002384 Genomic DNA No translation available.
RefSeqiNP_001303988.1, NM_001317059.1
UniGeneiRn.233103

Genome annotation databases

EnsembliENSRNOT00000021772; ENSRNOP00000021772; ENSRNOG00000016274
GeneIDi308336
KEGGirno:308336
UCSCiRGD:1306892 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002384 Genomic DNA No translation available.
RefSeqiNP_001303988.1, NM_001317059.1
UniGeneiRn.233103

3D structure databases

ProteinModelPortaliD4A235
SMRiD4A235
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000021772

Proteomic databases

PaxDbiD4A235
PRIDEiD4A235

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000021772; ENSRNOP00000021772; ENSRNOG00000016274
GeneIDi308336
KEGGirno:308336
UCSCiRGD:1306892 rat

Organism-specific databases

CTDi68992
RGDi1306892 Zfp580

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00920000149029
InParanoidiD4A235
OMAiQSHRISH
OrthoDBiEOG091G0STS
PhylomeDBiD4A235
TreeFamiTF338348

Gene expression databases

BgeeiENSRNOG00000016274 Expressed in 10 organ(s), highest expression level in brain
GenevisibleiD4A235 RN

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD4A235_RAT
AccessioniPrimary (citable) accession number: D4A235
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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