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Protein
Submitted name:

Zinc finger and BTB domain containing 20 (Predicted), isoform CRA_b

Gene

Zbtb20

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and BTB domain containing 20 (Predicted), isoform CRA_bImported
Submitted name:
Zinc finger and BTB domain-containing 20Imported
Gene namesi
Name:Zbtb20Imported
Synonyms:Zbtb20_predictedImported
ORF Names:rCG_52594Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1560387 Zbtb20

PTM / Processingi

Proteomic databases

PRIDEiD4A1U1

Expressioni

Gene expression databases

BgeeiENSRNOG00000056716 Expressed in 9 organ(s), highest expression level in heart
ExpressionAtlasiD4A1U1 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000002692

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini31 – 94BTBInterPro annotationAdd BLAST64
Domaini505 – 532C2H2-typeInterPro annotationAdd BLAST28
Domaini533 – 560C2H2-typeInterPro annotationAdd BLAST28
Domaini561 – 588C2H2-typeInterPro annotationAdd BLAST28
Domaini589 – 616C2H2-typeInterPro annotationAdd BLAST28
Domaini642 – 668C2H2-typeInterPro annotationAdd BLAST27

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000119063
KOiK10501
OMAiESTHCRK
OrthoDBiEOG091G02AP

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 5 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 5 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

D4A1U1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTERIHSINL HNFSNSVLET LNEQRNRGHF CDVTVRIHGS MLRAHRCVLA
60 70 80 90 100
AGSPFFQDKL LLGYSDIEIP SVVSVQSVQK LIDFMYSGVL RVSQSEALQI
110 120 130 140 150
LTAASILQIK TVIDECTRIV SQNVGDVFPG IQDSGQDTPR GTPESGTSGQ
160 170 180 190 200
SSDTESGYLQ SHPQHSVDRI YSALYACSMQ NGSGERSFYS GAVVSHHETA
210 220 230 240 250
LGLPRDHHME DPSWITRIHE RSQQMERYLS TTPETTHCRK QPRPVRIQTL
260 270 280 290 300
VGNIHIKQEM EDDYDYYGQQ RVQILERNES EECTEDTDQA EGTESEPKGE
310 320 330 340 350
SFDSGVSSSI GTEPDSVEQQ FGAGATREGQ VEAAQPEQAA EAPAESSAQP
360 370 380 390 400
NQLETGASSP ERSTEVEMDN TVITVSNSSD KGVLQQPSVN TSIGQPLPST
410 420 430 440 450
QLYLRQTETL TSNLRMPLTL TSNTQVIGTA GNTYLPALFT TQPAGSGPKP
460 470 480 490 500
FLFSLPQPLT GQQTQFVTVS QPGLSTFTAQ LPAPQPLASS ASHSTASGQG
510 520 530 540 550
DKKPYECTLC NKTFTAKQNY VKHMFVHTGE KPHQCSICWR SFSLKDYLIK
560 570 580 590 600
HMVTHTGVRA YQCSICNKRF TQKSSLNVHM RLHRGEKSYE CYICKKKFSH
610 620 630 640 650
KTLLERHVAL HSASNGTPPA GTPPGARAGP PGVVACTEGT TYVCSVCPAK
660
FDQIEQFNDH MRMHVSDG
Length:668
Mass (Da):73,421
Last modified:April 20, 2010 - v1
Checksum:iB08B538E840046C5
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1W2Q655A0A1W2Q655_RAT
Zinc finger and BTB domain containi...
Zbtb20 Zbtb20_predicted, rCG_52594
741Annotation score:
A0A1W2Q6A5A0A1W2Q6A5_RAT
Zinc finger and BTB domain-containi...
Zbtb20
78Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034277 Genomic DNA No translation available.
AABR07034278 Genomic DNA No translation available.
AABR07072236 Genomic DNA No translation available.
CH473967 Genomic DNA Translation: EDM11179.1
CH473967 Genomic DNA Translation: EDM11184.1
RefSeqiNP_001099350.1, NM_001105880.1
UniGeneiRn.95153

Genome annotation databases

EnsembliENSRNOT00000081443; ENSRNOP00000072458; ENSRNOG00000056716
ENSRNOT00000093141; ENSRNOP00000076280; ENSRNOG00000056716
ENSRNOT00000093179; ENSRNOP00000076193; ENSRNOG00000056716
GeneIDi288105
KEGGirno:288105
UCSCiRGD:1560387 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07034277 Genomic DNA No translation available.
AABR07034278 Genomic DNA No translation available.
AABR07072236 Genomic DNA No translation available.
CH473967 Genomic DNA Translation: EDM11179.1
CH473967 Genomic DNA Translation: EDM11184.1
RefSeqiNP_001099350.1, NM_001105880.1
UniGeneiRn.95153

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000002692

Proteomic databases

PRIDEiD4A1U1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000081443; ENSRNOP00000072458; ENSRNOG00000056716
ENSRNOT00000093141; ENSRNOP00000076280; ENSRNOG00000056716
ENSRNOT00000093179; ENSRNOP00000076193; ENSRNOG00000056716
GeneIDi288105
KEGGirno:288105
UCSCiRGD:1560387 rat

Organism-specific databases

CTDi26137
RGDi1560387 Zbtb20

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000119063
KOiK10501
OMAiESTHCRK
OrthoDBiEOG091G02AP

Gene expression databases

BgeeiENSRNOG00000056716 Expressed in 9 organ(s), highest expression level in heart
ExpressionAtlasiD4A1U1 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
PF00096 zf-C2H2, 5 hits
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 5 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD4A1U1_RAT
AccessioniPrimary (citable) accession number: D4A1U1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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