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Protein
Submitted name:

Fer3-like (Drosophila) (Predicted)

Gene

Ferd3l

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Fer3-like (Drosophila) (Predicted)Imported
Submitted name:
Fer3-like bHLH transcription factorImported
Gene namesi
Name:Ferd3lImported
Synonyms:Ferd3l_predictedImported
ORF Names:rCG_61668Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi1311812 Ferd3l

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD4A114

Expressioni

Gene expression databases

BgeeiENSRNOG00000011091 Expressed in 1 organ(s), highest expression level in adult mammalian kidney

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014731

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini101 – 153BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiKOG4029 Eukaryota
ENOG411227D LUCA
GeneTreeiENSGT00730000110958
KOiK22400
OMAiYPQSCVD
OrthoDBiEOG091G0YNB

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D4A114-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAYPESCLD ANVLNFVADL SLASPRHPFL CEFPPGVPFE DQTLGFREGR
60 70 80 90 100
GLLQFEGRYQ EVEGGEVDYE DPEEEEEEGE GRGRVASLLG RPKRKRVITY
110 120 130 140 150
AQRQAANIRE RKRMFNLNEA FDQLRRKVPT FAYEKRLSRI ETLRLAIVYI
160
SFMTELLQSK EEKEAS
Length:166
Mass (Da):19,181
Last modified:April 20, 2010 - v1
Checksum:i2B711D6C6A38D117
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07063875 Genomic DNA No translation available.
CH473947 Genomic DNA Translation: EDM03296.1
RefSeqiNP_001102450.1, NM_001108980.1
UniGeneiRn.218515

Genome annotation databases

EnsembliENSRNOT00000014731; ENSRNOP00000014731; ENSRNOG00000011091
GeneIDi366598
KEGGirno:366598
UCSCiRGD:1311812 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07063875 Genomic DNA No translation available.
CH473947 Genomic DNA Translation: EDM03296.1
RefSeqiNP_001102450.1, NM_001108980.1
UniGeneiRn.218515

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000014731

Proteomic databases

PRIDEiD4A114

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000014731; ENSRNOP00000014731; ENSRNOG00000011091
GeneIDi366598
KEGGirno:366598
UCSCiRGD:1311812 rat

Organism-specific databases

CTDi222894
RGDi1311812 Ferd3l

Phylogenomic databases

eggNOGiKOG4029 Eukaryota
ENOG411227D LUCA
GeneTreeiENSGT00730000110958
KOiK22400
OMAiYPQSCVD
OrthoDBiEOG091G0YNB

Gene expression databases

BgeeiENSRNOG00000011091 Expressed in 1 organ(s), highest expression level in adult mammalian kidney

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD4A114_RAT
AccessioniPrimary (citable) accession number: D4A114
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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