Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

UniProtKB - D3ZZP8 (D3ZZP8_RAT)

Entry version 87 (02 Dec 2020)
Sequence version 2 (03 Apr 2013)
Previous versions | rss
Add a publicationFeedback
Protein
Submitted name:

Cullin 9

Gene

Cul9

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

GO - Biological processi

Complete GO annotation on QuickGO ...

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionTransferaseARBA annotation
Biological processUbl conjugation pathwayARBA annotation
LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...Reactomei		R-RNO-8951664, Neddylation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Cullin 9Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Cul9Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

Organism-specific databases

Rat genome database

More...RGDi		1562008, Cul9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Keywords - PTMi

Ubl conjugationARBA annotation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		D3ZZP8

PeptideAtlas

More...PeptideAtlasi		D3ZZP8

PRoteomics IDEntifications database

More...PRIDEi		D3ZZP8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSRNOG00000018372, Expressed in brain and 21 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...ExpressionAtlasi		D3ZZP8, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Complete GO annotation on QuickGO ...

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		10116.ENSRNOP00000028786

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1136 – 1315DOCInterPro annotationAdd BLAST180
Domaini1537 – 1805CULLIN_2InterPro annotationAdd BLAST269
Domaini2060 – 2277RING-typeInterPro annotationAdd BLAST218
Domaini2230 – 2273RING-typeInterPro annotationAdd BLAST44

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni275 – 294DisorderedSequence analysisAdd BLAST20
Regioni576 – 631DisorderedSequence analysisAdd BLAST56
Regioni1426 – 1458DisorderedSequence analysisAdd BLAST33
Regioni2433 – 2514DisorderedSequence analysisAdd BLAST82

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili112 – 132Sequence analysisAdd BLAST21
Coiled coili1649 – 1669Sequence analysisAdd BLAST21
Coiled coili2359 – 2379Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi601 – 617PolyampholyteSequence analysisAdd BLAST17
Compositional biasi1437 – 1458PolarSequence analysisAdd BLAST22
Compositional biasi2433 – 2452PolarSequence analysisAdd BLAST20
Compositional biasi2453 – 2490AcidicSequence analysisAdd BLAST38

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the cullin family.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coilSequence analysis, RepeatARBA annotation, Zinc-fingerPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		KOG1815, Eukaryota

Ensembl GeneTree

More...GeneTreei		ENSGT00940000153954

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		CLU_001067_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		D3ZZP8

Identification of Orthologs from Complete Genome Data

More...OMAi		KPWKPNH

Database of Orthologous Groups

More...OrthoDBi		469819at2759

TreeFam database of animal gene trees

More...TreeFami		TF101154

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		2.30.30.30, 1 hit
2.60.120.260, 1 hit
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR004939, APC_su10/DOC_dom
IPR016024, ARM-type_fold
IPR021097, CPH_domain
IPR031222, CUL9
IPR016157, Cullin_CS
IPR016158, Cullin_homology
IPR036317, Cullin_homology_sf
IPR001373, Cullin_N
IPR019559, Cullin_neddylation_domain
IPR008979, Galactose-bd-like_sf
IPR002867, IBR_dom
IPR014722, Rib_L2_dom2
IPR044066, TRIAD_supradom
IPR001841, Znf_RING
IPR013083, Znf_RING/FYVE/PHD
IPR017907, Znf_RING_CS

The PANTHER Classification System

More...PANTHERi		PTHR22771:SF2, PTHR22771:SF2, 1 hit

Pfam protein domain database

More...Pfami		View protein in Pfam
PF03256, ANAPC10, 1 hit
PF11515, Cul7, 1 hit
PF00888, Cullin, 1 hit
PF01485, IBR, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM01337, APC10, 1 hit
SM00884, Cullin_Nedd8, 1 hit
SM00647, IBR, 2 hits

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF48371, SSF48371, 1 hit
SSF49785, SSF49785, 1 hit
SSF75632, SSF75632, 1 hit

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS01256, CULLIN_1, 1 hit
PS50069, CULLIN_2, 1 hit
PS51284, DOC, 1 hit
PS51873, TRIAD, 1 hit
PS00518, ZF_RING_1, 1 hit
PS50089, ZF_RING_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZZP8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVGEQRAGDL MVPLGPRLQA YPEELIRQRP GHDGHPEYLI RWRVLKCSEE 
        60         70         80         90        100
GKVSLEEEKT EYLLMWLSAP EVYANCPMLL RERSVSKGPQ YEPTGEVGSF 
       110        120        130        140        150
PRDPGGLDEL AMAEMEDDVR ALVRRAARQL AEGGASNLTV AVLHTIHVLS 
       160        170        180        190        200
AYASIGPLTG VFRETGALDL LMHMLCSPEP QIRRSAGKML QALAAHDAGS 
       210        220        230        240        250
RAHVLLSLSQ HEGIEQHMDF DSRYTLLELF AETTSTEEHC MALEGIHLPQ 
       260        270        280        290        300
LPGKLLFSLV KRYLCVTSLL DQLNNSPESG AGDQSSPCLP KEKSRGQREL 
       310        320        330        340        350
EFSMAVGNLI SELVRSMGWA RNLSEQGALP PRPSRSIFQP CLSGPPLLLP 
       360        370        380        390        400
TIVTTPRKPG RAFRGRSEFS SRSGYGEYVQ QTVQPGMRVR ILDDYEEISA 
       410        420        430        440        450
GDEGEFQQSN NGVPPVQVFW QSTGRTYWVH WHMLEILGPE EATREPASAA 
       460        470        480        490        500
VEKGAGATAL GTACPSWDRK PAHGLYSLPY LQPESQKSEE PGYLTQGEWW 
       510        520        530        540        550
ELLFFIKKLD LCEQQPIFQN LHEKLDKEAV GEKTLGEISV PIEMAEGVLQ 
       560        570        580        590        600
VLSNRFEGSN LCDLLNSHIY TKYGRLPKEP GRLPPSRGHS CTSEPEEGSE 
       610        620        630        640        650
SAASFSEKEE SPKAEAEPAG AKPESPKAQS DSQLFNQLLV TEGMALAPET 
       660        670        680        690        700
QAAATEMART LRGPGPRSSL DQHVAAVLAT VQISSLDTNL QLSGLGALSQ 
       710        720        730        740        750
AVEEVTERDH PLVRPDRSLR EKLVKTLVDL LTNQVGEKMV VVLALRLLYL 
       760        770        780        790        800
LMTKHEWRPL FAREGGIYAV LICMQEYKTS VLVQQAGLAA LKMLAIANSS 
       810        820        830        840        850
EVPTFVTGRD SIQPLFDTQM TREIFASIDS ATRPGSESLL LSVPAAVVLM 
       860        870        880        890        900
LNTEGCSSAV RNGLLLLNLL LCNHHTLGDQ IITQELRDTL FRHSGIAPGT 
       910        920        930        940        950
EPMPTTRTIL MMLLSRYSEP WGSPERAALE TPSTQGQDGS PESLIRSLVG 
       960        970        980        990       1000
DLSAELFLDL ERVLCHEGSP QGAMTPLLKR LQQETQPFLL LLRTLDAPGP 
      1010       1020       1030       1040       1050
NRALLLTVLR VMTRLLDYPE TMVLPWHEVL EPCLNCLNGP SSDSEVVQEL 
      1060       1070       1080       1090       1100
TCFLHRLALM HKDYAVVLCC LGAKEALSKV LDKHSTQLLL ASELRHLVTE 
      1110       1120       1130       1140       1150
CEKYAQLYTN LTSSLLAACI QMVLGQIEDH RRTYKPINIP FFDVFLRHLC 
      1160       1170       1180       1190       1200
QGSSVEVKED RCWEKVEVSS NPHRASKLTD RNPKTYWESN GSTGSHSITL 
      1210       1220       1230       1240       1250
HMHRGVLIRQ LTLLVASEDS SYMPARVVVF GGDSVGCIST ELNTVNVVPS 
      1260       1270       1280       1290       1300
ASRVTLLENL SRFWPIIQIR IKRCQQGGID TRVRGVEVLG PKPTFWPLFR 
      1310       1320       1330       1340       1350
EQLCRRTCLF YTIRAQAWSR DIAEDRQRLL QLYPRLNRVL RHEQNFADRF 
      1360       1370       1380       1390       1400
LPDDEAAQAL GKTCWEALVS PLVQNITSPD AGGVSSLGWL LDQYLEHREK 
      1410       1420       1430       1440       1450
ARSRQGQAAS FASQVRRLCH LLVHVEAPPG PSPEPSSQPL SKSSKSQDGS 
      1460       1470       1480       1490       1500
PAPAPVRPST TLRNITQCWL AVVQGQASRF LASAWRASDF VPRYCDLYER 
      1510       1520       1530       1540       1550
LQRAGSELFG PRAAFTLALR SGFSGALLQQ SFLTAAHISE QFARHIDQQI 
      1560       1570       1580       1590       1600
QGGLLGGAAG VEMLGRLQRH LEPIMVLSGL ELATTFEHFY QYYMADRLLS 
      1610       1620       1630       1640       1650
LGSSWLEGAV LEQIGLCFPN RLPQLMLQSL RTSEELQRGF LLFQLQQLDR 
      1660       1670       1680       1690       1700
QLLEQGEQEE WKLERLEEED RGQETGRELL TEDPGPAISV LVLSPRCWPV 
      1710       1720       1730       1740       1750
SPLCYLHQPR KHLPTEFCDA LDGFSSFYSH SQHYPVLDMG PHRRLQWTWL 
      1760       1770       1780       1790       1800
GRAELQFGDQ TLHVSTVQMW LLLNFNQTEE VSVEILLRNS GLSPELLHQA 
      1810       1820       1830       1840       1850
LLPLTSDSGP LTLEEAQDFP QGGVLRLREP RSQTHEEVLW LIPPQTYLSV 
      1860       1870       1880       1890       1900
EKDEGRTLEQ KRNLLSCLLV RILKAHGEKG LHIDQLVCLV LEAWQKGPNP 
      1910       1920       1930       1940       1950
PGRLGRSAAV GVACSSTDVL SCILHLLGQG YVERRDDRPQ VLMYATPEPM 
      1960       1970       1980       1990       2000
GHCRGQADVP FCGNQSTETS KPSPEAVVAL ASLQLPAGRT MSPQEVEGLM 
      2010       2020       2030       2040       2050
EQTVRQVQET LNLEPDVAQH LLAYSHWGTE QLLQSYSEDP EPLLLAAGLR 
      2060       2070       2080       2090       2100
VPQPQEVPAR PDQCPVCISP LGPNDDSPSL CCLHCCCKSC WNEYLTTRIE 
      2110       2120       2130       2140       2150
QNFVLNCTCP IADCPAQPTG AFIRNIVSSP EVISKYEKAL LRGYVESCSN 
      2160       2170       2180       2190       2200
LTWCTNPQGC DRILCRQGLG SGTTCSKCGW ASCFNCSFPE AHYPASCGHM 
      2210       2220       2230       2240       2250
SQWVDDGGYY DGMSVEAQSK HLAKLISKRC PSCQAPIEKN EGCLHMTCAR 
      2260       2270       2280       2290       2300
CNHGFCWRCL RSWKPSHKDY YNCSAMVSKA ARQEKRFQDY NERCTFHHQA 
      2310       2320       2330       2340       2350
REFAVNLRNQ ASAIHEVPPP KSFTFLQDAC RALEQARKVL AYACVYSFYS 
      2360       2370       2380       2390       2400
QGTEYMDVVE QQTENLELHT NALQILLEET LLRCQDLASS LRLLRADCLS 
      2410       2420       2430       2440       2450
TGTELLRRIQ ERLLAILQHS TQDFRVGLQS PSVETREVKG SNVPSDQPQG 
      2460       2470       2480       2490       2500
SSGLEVEDEE EEEEEEEEED VPEWQHEFDE ELDNDSFSYD EESENLDRET 
      2510 
FFFGDEDDDD ESYD
Length:2,514
Mass (Da):280,695
Last modified:April 3, 2013 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAEA2D143F673E925
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2K652A0A0G2K652_RAT
Cullin 9
Cul9
2,513Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AABR07066803 Genomic DNA No translation available.
AABR07066804 Genomic DNA No translation available.
AABR07066805 Genomic DNA No translation available.
AABR07066806 Genomic DNA No translation available.
AABR07066807 Genomic DNA No translation available.
AABR07066808 Genomic DNA No translation available.
AABR07066809 Genomic DNA No translation available.
AABR07066810 Genomic DNA No translation available.

NCBI Reference Sequences

More...RefSeqi		NP_001178511.1, NM_001191582.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSRNOT00000028786; ENSRNOP00000028786; ENSRNOG00000018372

Database of genes from NCBI RefSeq genomes

More...GeneIDi		316228

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		rno:316228

UCSC genome browser

More...UCSCi		RGD:1562008, rat

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07066803 Genomic DNA No translation available.
AABR07066804 Genomic DNA No translation available.
AABR07066805 Genomic DNA No translation available.
AABR07066806 Genomic DNA No translation available.
AABR07066807 Genomic DNA No translation available.
AABR07066808 Genomic DNA No translation available.
AABR07066809 Genomic DNA No translation available.
AABR07066810 Genomic DNA No translation available.
RefSeqiNP_001178511.1, NM_001191582.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028786

Proteomic databases

PaxDbiD3ZZP8
PeptideAtlasiD3ZZP8
PRIDEiD3ZZP8

Genome annotation databases

EnsembliENSRNOT00000028786; ENSRNOP00000028786; ENSRNOG00000018372
GeneIDi316228
KEGGirno:316228
UCSCiRGD:1562008, rat

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		23113
RGDi1562008, Cul9

Phylogenomic databases

eggNOGiKOG1815, Eukaryota
GeneTreeiENSGT00940000153954
HOGENOMiCLU_001067_0_0_1
InParanoidiD3ZZP8
OMAiKPWKPNH
OrthoDBi469819at2759
TreeFamiTF101154

Enzyme and pathway databases

ReactomeiR-RNO-8951664, Neddylation

Gene expression databases

BgeeiENSRNOG00000018372, Expressed in brain and 21 other tissues
ExpressionAtlasiD3ZZP8, baseline and differential

Family and domain databases

Gene3Di2.30.30.30, 1 hit
2.60.120.260, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR004939, APC_su10/DOC_dom
IPR016024, ARM-type_fold
IPR021097, CPH_domain
IPR031222, CUL9
IPR016157, Cullin_CS
IPR016158, Cullin_homology
IPR036317, Cullin_homology_sf
IPR001373, Cullin_N
IPR019559, Cullin_neddylation_domain
IPR008979, Galactose-bd-like_sf
IPR002867, IBR_dom
IPR014722, Rib_L2_dom2
IPR044066, TRIAD_supradom
IPR001841, Znf_RING
IPR013083, Znf_RING/FYVE/PHD
IPR017907, Znf_RING_CS
PANTHERiPTHR22771:SF2, PTHR22771:SF2, 1 hit
PfamiView protein in Pfam
PF03256, ANAPC10, 1 hit
PF11515, Cul7, 1 hit
PF00888, Cullin, 1 hit
PF01485, IBR, 2 hits
SMARTiView protein in SMART
SM01337, APC10, 1 hit
SM00884, Cullin_Nedd8, 1 hit
SM00647, IBR, 2 hits
SUPFAMiSSF48371, SSF48371, 1 hit
SSF49785, SSF49785, 1 hit
SSF75632, SSF75632, 1 hit
PROSITEiView protein in PROSITE
PS01256, CULLIN_1, 1 hit
PS50069, CULLIN_2, 1 hit
PS51284, DOC, 1 hit
PS51873, TRIAD, 1 hit
PS00518, ZF_RING_1, 1 hit
PS50089, ZF_RING_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD3ZZP8_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D3ZZP8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: December 2, 2020
This is version 87 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again