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Entry version 88 (10 Feb 2021)
Sequence version 2 (03 Apr 2013)
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Protein
Submitted name:

Cullin 9

Gene

Cul9

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionTransferaseARBA annotation
Biological processUbl conjugation pathwayARBA annotation
LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-RNO-8951664, Neddylation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Cullin 9Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Cul9Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 9

Organism-specific databases

Rat genome database

More...
RGDi
1562008, Cul9

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Keywords - PTMi

Ubl conjugationARBA annotation

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
D3ZZP8

PeptideAtlas

More...
PeptideAtlasi
D3ZZP8

PRoteomics IDEntifications database

More...
PRIDEi
D3ZZP8

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000018372, Expressed in brain and 21 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
D3ZZP8, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10116.ENSRNOP00000028786

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1136 – 1315DOCInterPro annotationAdd BLAST180
Domaini1537 – 1805CULLIN_2InterPro annotationAdd BLAST269
Domaini2060 – 2277RING-typeInterPro annotationAdd BLAST218
Domaini2230 – 2273RING-typeInterPro annotationAdd BLAST44

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni275 – 294DisorderedSequence analysisAdd BLAST20
Regioni576 – 631DisorderedSequence analysisAdd BLAST56
Regioni1426 – 1458DisorderedSequence analysisAdd BLAST33
Regioni2433 – 2514DisorderedSequence analysisAdd BLAST82

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili112 – 132Sequence analysisAdd BLAST21
Coiled coili1649 – 1669Sequence analysisAdd BLAST21
Coiled coili2359 – 2379Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi601 – 617PolyampholyteSequence analysisAdd BLAST17
Compositional biasi1437 – 1458PolarSequence analysisAdd BLAST22
Compositional biasi2433 – 2452PolarSequence analysisAdd BLAST20
Compositional biasi2453 – 2490AcidicSequence analysisAdd BLAST38

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the cullin family.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coilSequence analysis, RepeatARBA annotation, Zinc-fingerPROSITE-ProRule annotationARBA annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1815, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000153954

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001067_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
D3ZZP8

Identification of Orthologs from Complete Genome Data

More...
OMAi
KPWKPNH

Database of Orthologous Groups

More...
OrthoDBi
469819at2759

TreeFam database of animal gene trees

More...
TreeFami
TF101154

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.30.30.30, 1 hit
2.60.120.260, 1 hit
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR004939, APC_su10/DOC_dom
IPR016024, ARM-type_fold
IPR021097, CPH_domain
IPR031222, CUL9
IPR016157, Cullin_CS
IPR016158, Cullin_homology
IPR036317, Cullin_homology_sf
IPR001373, Cullin_N
IPR019559, Cullin_neddylation_domain
IPR008979, Galactose-bd-like_sf
IPR002867, IBR_dom
IPR014722, Rib_L2_dom2
IPR044066, TRIAD_supradom
IPR001841, Znf_RING
IPR013083, Znf_RING/FYVE/PHD
IPR017907, Znf_RING_CS

The PANTHER Classification System

More...
PANTHERi
PTHR22771:SF2, PTHR22771:SF2, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03256, ANAPC10, 1 hit
PF11515, Cul7, 1 hit
PF00888, Cullin, 1 hit
PF01485, IBR, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01337, APC10, 1 hit
SM00884, Cullin_Nedd8, 1 hit
SM00647, IBR, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371, SSF48371, 1 hit
SSF49785, SSF49785, 1 hit
SSF75632, SSF75632, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01256, CULLIN_1, 1 hit
PS50069, CULLIN_2, 1 hit
PS51284, DOC, 1 hit
PS51873, TRIAD, 1 hit
PS00518, ZF_RING_1, 1 hit
PS50089, ZF_RING_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZZP8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVGEQRAGDL MVPLGPRLQA YPEELIRQRP GHDGHPEYLI RWRVLKCSEE
60 70 80 90 100
GKVSLEEEKT EYLLMWLSAP EVYANCPMLL RERSVSKGPQ YEPTGEVGSF
110 120 130 140 150
PRDPGGLDEL AMAEMEDDVR ALVRRAARQL AEGGASNLTV AVLHTIHVLS
160 170 180 190 200
AYASIGPLTG VFRETGALDL LMHMLCSPEP QIRRSAGKML QALAAHDAGS
210 220 230 240 250
RAHVLLSLSQ HEGIEQHMDF DSRYTLLELF AETTSTEEHC MALEGIHLPQ
260 270 280 290 300
LPGKLLFSLV KRYLCVTSLL DQLNNSPESG AGDQSSPCLP KEKSRGQREL
310 320 330 340 350
EFSMAVGNLI SELVRSMGWA RNLSEQGALP PRPSRSIFQP CLSGPPLLLP
360 370 380 390 400
TIVTTPRKPG RAFRGRSEFS SRSGYGEYVQ QTVQPGMRVR ILDDYEEISA
410 420 430 440 450
GDEGEFQQSN NGVPPVQVFW QSTGRTYWVH WHMLEILGPE EATREPASAA
460 470 480 490 500
VEKGAGATAL GTACPSWDRK PAHGLYSLPY LQPESQKSEE PGYLTQGEWW
510 520 530 540 550
ELLFFIKKLD LCEQQPIFQN LHEKLDKEAV GEKTLGEISV PIEMAEGVLQ
560 570 580 590 600
VLSNRFEGSN LCDLLNSHIY TKYGRLPKEP GRLPPSRGHS CTSEPEEGSE
610 620 630 640 650
SAASFSEKEE SPKAEAEPAG AKPESPKAQS DSQLFNQLLV TEGMALAPET
660 670 680 690 700
QAAATEMART LRGPGPRSSL DQHVAAVLAT VQISSLDTNL QLSGLGALSQ
710 720 730 740 750
AVEEVTERDH PLVRPDRSLR EKLVKTLVDL LTNQVGEKMV VVLALRLLYL
760 770 780 790 800
LMTKHEWRPL FAREGGIYAV LICMQEYKTS VLVQQAGLAA LKMLAIANSS
810 820 830 840 850
EVPTFVTGRD SIQPLFDTQM TREIFASIDS ATRPGSESLL LSVPAAVVLM
860 870 880 890 900
LNTEGCSSAV RNGLLLLNLL LCNHHTLGDQ IITQELRDTL FRHSGIAPGT
910 920 930 940 950
EPMPTTRTIL MMLLSRYSEP WGSPERAALE TPSTQGQDGS PESLIRSLVG
960 970 980 990 1000
DLSAELFLDL ERVLCHEGSP QGAMTPLLKR LQQETQPFLL LLRTLDAPGP
1010 1020 1030 1040 1050
NRALLLTVLR VMTRLLDYPE TMVLPWHEVL EPCLNCLNGP SSDSEVVQEL
1060 1070 1080 1090 1100
TCFLHRLALM HKDYAVVLCC LGAKEALSKV LDKHSTQLLL ASELRHLVTE
1110 1120 1130 1140 1150
CEKYAQLYTN LTSSLLAACI QMVLGQIEDH RRTYKPINIP FFDVFLRHLC
1160 1170 1180 1190 1200
QGSSVEVKED RCWEKVEVSS NPHRASKLTD RNPKTYWESN GSTGSHSITL
1210 1220 1230 1240 1250
HMHRGVLIRQ LTLLVASEDS SYMPARVVVF GGDSVGCIST ELNTVNVVPS
1260 1270 1280 1290 1300
ASRVTLLENL SRFWPIIQIR IKRCQQGGID TRVRGVEVLG PKPTFWPLFR
1310 1320 1330 1340 1350
EQLCRRTCLF YTIRAQAWSR DIAEDRQRLL QLYPRLNRVL RHEQNFADRF
1360 1370 1380 1390 1400
LPDDEAAQAL GKTCWEALVS PLVQNITSPD AGGVSSLGWL LDQYLEHREK
1410 1420 1430 1440 1450
ARSRQGQAAS FASQVRRLCH LLVHVEAPPG PSPEPSSQPL SKSSKSQDGS
1460 1470 1480 1490 1500
PAPAPVRPST TLRNITQCWL AVVQGQASRF LASAWRASDF VPRYCDLYER
1510 1520 1530 1540 1550
LQRAGSELFG PRAAFTLALR SGFSGALLQQ SFLTAAHISE QFARHIDQQI
1560 1570 1580 1590 1600
QGGLLGGAAG VEMLGRLQRH LEPIMVLSGL ELATTFEHFY QYYMADRLLS
1610 1620 1630 1640 1650
LGSSWLEGAV LEQIGLCFPN RLPQLMLQSL RTSEELQRGF LLFQLQQLDR
1660 1670 1680 1690 1700
QLLEQGEQEE WKLERLEEED RGQETGRELL TEDPGPAISV LVLSPRCWPV
1710 1720 1730 1740 1750
SPLCYLHQPR KHLPTEFCDA LDGFSSFYSH SQHYPVLDMG PHRRLQWTWL
1760 1770 1780 1790 1800
GRAELQFGDQ TLHVSTVQMW LLLNFNQTEE VSVEILLRNS GLSPELLHQA
1810 1820 1830 1840 1850
LLPLTSDSGP LTLEEAQDFP QGGVLRLREP RSQTHEEVLW LIPPQTYLSV
1860 1870 1880 1890 1900
EKDEGRTLEQ KRNLLSCLLV RILKAHGEKG LHIDQLVCLV LEAWQKGPNP
1910 1920 1930 1940 1950
PGRLGRSAAV GVACSSTDVL SCILHLLGQG YVERRDDRPQ VLMYATPEPM
1960 1970 1980 1990 2000
GHCRGQADVP FCGNQSTETS KPSPEAVVAL ASLQLPAGRT MSPQEVEGLM
2010 2020 2030 2040 2050
EQTVRQVQET LNLEPDVAQH LLAYSHWGTE QLLQSYSEDP EPLLLAAGLR
2060 2070 2080 2090 2100
VPQPQEVPAR PDQCPVCISP LGPNDDSPSL CCLHCCCKSC WNEYLTTRIE
2110 2120 2130 2140 2150
QNFVLNCTCP IADCPAQPTG AFIRNIVSSP EVISKYEKAL LRGYVESCSN
2160 2170 2180 2190 2200
LTWCTNPQGC DRILCRQGLG SGTTCSKCGW ASCFNCSFPE AHYPASCGHM
2210 2220 2230 2240 2250
SQWVDDGGYY DGMSVEAQSK HLAKLISKRC PSCQAPIEKN EGCLHMTCAR
2260 2270 2280 2290 2300
CNHGFCWRCL RSWKPSHKDY YNCSAMVSKA ARQEKRFQDY NERCTFHHQA
2310 2320 2330 2340 2350
REFAVNLRNQ ASAIHEVPPP KSFTFLQDAC RALEQARKVL AYACVYSFYS
2360 2370 2380 2390 2400
QGTEYMDVVE QQTENLELHT NALQILLEET LLRCQDLASS LRLLRADCLS
2410 2420 2430 2440 2450
TGTELLRRIQ ERLLAILQHS TQDFRVGLQS PSVETREVKG SNVPSDQPQG
2460 2470 2480 2490 2500
SSGLEVEDEE EEEEEEEEED VPEWQHEFDE ELDNDSFSYD EESENLDRET
2510
FFFGDEDDDD ESYD
Length:2,514
Mass (Da):280,695
Last modified:April 3, 2013 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iAEA2D143F673E925
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2K652A0A0G2K652_RAT
Cullin 9
Cul9
2,513Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AABR07066803 Genomic DNA No translation available.
AABR07066804 Genomic DNA No translation available.
AABR07066805 Genomic DNA No translation available.
AABR07066806 Genomic DNA No translation available.
AABR07066807 Genomic DNA No translation available.
AABR07066808 Genomic DNA No translation available.
AABR07066809 Genomic DNA No translation available.
AABR07066810 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
NP_001178511.1, NM_001191582.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000028786; ENSRNOP00000028786; ENSRNOG00000018372

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
316228

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
rno:316228

UCSC genome browser

More...
UCSCi
RGD:1562008, rat

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07066803 Genomic DNA No translation available.
AABR07066804 Genomic DNA No translation available.
AABR07066805 Genomic DNA No translation available.
AABR07066806 Genomic DNA No translation available.
AABR07066807 Genomic DNA No translation available.
AABR07066808 Genomic DNA No translation available.
AABR07066809 Genomic DNA No translation available.
AABR07066810 Genomic DNA No translation available.
RefSeqiNP_001178511.1, NM_001191582.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000028786

Proteomic databases

PaxDbiD3ZZP8
PeptideAtlasiD3ZZP8
PRIDEiD3ZZP8

Genome annotation databases

EnsembliENSRNOT00000028786; ENSRNOP00000028786; ENSRNOG00000018372
GeneIDi316228
KEGGirno:316228
UCSCiRGD:1562008, rat

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
23113
RGDi1562008, Cul9

Phylogenomic databases

eggNOGiKOG1815, Eukaryota
GeneTreeiENSGT00940000153954
HOGENOMiCLU_001067_0_0_1
InParanoidiD3ZZP8
OMAiKPWKPNH
OrthoDBi469819at2759
TreeFamiTF101154

Enzyme and pathway databases

ReactomeiR-RNO-8951664, Neddylation

Gene expression databases

BgeeiENSRNOG00000018372, Expressed in brain and 21 other tissues
ExpressionAtlasiD3ZZP8, baseline and differential

Family and domain databases

Gene3Di2.30.30.30, 1 hit
2.60.120.260, 1 hit
3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR004939, APC_su10/DOC_dom
IPR016024, ARM-type_fold
IPR021097, CPH_domain
IPR031222, CUL9
IPR016157, Cullin_CS
IPR016158, Cullin_homology
IPR036317, Cullin_homology_sf
IPR001373, Cullin_N
IPR019559, Cullin_neddylation_domain
IPR008979, Galactose-bd-like_sf
IPR002867, IBR_dom
IPR014722, Rib_L2_dom2
IPR044066, TRIAD_supradom
IPR001841, Znf_RING
IPR013083, Znf_RING/FYVE/PHD
IPR017907, Znf_RING_CS
PANTHERiPTHR22771:SF2, PTHR22771:SF2, 1 hit
PfamiView protein in Pfam
PF03256, ANAPC10, 1 hit
PF11515, Cul7, 1 hit
PF00888, Cullin, 1 hit
PF01485, IBR, 2 hits
SMARTiView protein in SMART
SM01337, APC10, 1 hit
SM00884, Cullin_Nedd8, 1 hit
SM00647, IBR, 2 hits
SUPFAMiSSF48371, SSF48371, 1 hit
SSF49785, SSF49785, 1 hit
SSF75632, SSF75632, 1 hit
PROSITEiView protein in PROSITE
PS01256, CULLIN_1, 1 hit
PS50069, CULLIN_2, 1 hit
PS51284, DOC, 1 hit
PS51873, TRIAD, 1 hit
PS00518, ZF_RING_1, 1 hit
PS50089, ZF_RING_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
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MobiDB: a database of protein disorder and mobility annotations

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MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD3ZZP8_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D3ZZP8
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: February 10, 2021
This is version 88 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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