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Protein
Submitted name:

Zinc finger protein 280C

Gene

Zfp280c

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein 280CImported
Gene namesi
Name:Zfp280cImported
Synonyms:Suhw3Imported, Zfp981Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome X

Organism-specific databases

RGDi1564669 Zfp280c

PTM / Processingi

Proteomic databases

PaxDbiD3ZZ25
PeptideAtlasiD3ZZ25

Expressioni

Gene expression databases

BgeeiENSRNOG00000006797 Expressed in 9 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051158

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini305 – 325C2H2-typeInterPro annotationAdd BLAST21
Domaini342 – 363C2H2-typeInterPro annotationAdd BLAST22
Domaini372 – 393C2H2-typeInterPro annotationAdd BLAST22
Domaini459 – 479C2H2-typeInterPro annotationAdd BLAST21

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili6 – 26Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063300
InParanoidiD3ZZ25
OMAiFYYGRHE
OrthoDBiEOG091G01UE
TreeFamiTF331707

Family and domain databases

InterProiView protein in InterPro
IPR025243 DUF4195
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF13836 DUF4195, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 9 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits

Sequencei

Sequence statusi: Complete.

D3ZZ25-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAELIMECEE EELEPWQQKV EESQNKDDDD DDDELIFVGE ISSSKPAISN
60 70 80 90 100
ILNRCSPGSS SKGLKNGSFS PALSNIFKPT NQHYRNPPSH PLIALPSFYP
110 120 130 140 150
APKSSESSDV QTVSKPTFLK TSPQDDSGAS SASLLDSTKD IPSSNVLQKS
160 170 180 190 200
TGVNQTLRLK HPSSSKVNSV NPKKPKTNAS ISETGRGSAS SLNMSPSEAS
210 220 230 240 250
SQVVLSNMNT SSIQSAAGKP SLRSCPKCNV KFSLLDPLKC HMKRCCPDMI
260 270 280 290 300
NKFLETLKSE NSKAVSRAII GSDKEKLIML VSDFYYGRHE GTIEEDQKAP
310 320 330 340 350
TTFKCFSCTK VLKNNIRFMN HMKHHLEFEK QNNETWESHT TCQHCYRQYP
360 370 380 390 400
NPFQLQCHIE STHTPHDFST ICKICELSFE TEHLLLQHMK DTHKPGEMPY
410 420 430 440 450
ICQVCQFRSS IFSDVETHFR SSHENTKNLL CPFCLKVSRM ATPYMNHYMR
460 470 480 490 500
HQKKGIYRCP KCRLQFLTSK EKIDHKLEHR TFIKPKELEG LPPGTKVTIR
510 520 530 540 550
ASLGSIQSRS SSPPSSTIPS TSLQLSVPKS KTTTTKNTTT KNNSKVSANK
560 570 580 590 600
VTTTSPQTMS TTTGKTNASK PGTGTTKSKA KPSNKQKRQR TRKNKFSIDL
610 620 630 640 650
RNLRCHQGTH TCIECHSKIK DFSSHFSTYI NCDFCKYTTN CNKAFTNHMS
660 670 680 690 700
SHNDHPSKQL CIFKKHSRAL RGITLVCLKC DFLADTSGLD RMAKHLNQRK
710 720
THTCQVVIEN VTERTGTSES TSDGLLK
Length:727
Mass (Da):81,502
Last modified:July 22, 2015 - v3
Checksum:i330F9C362E7325D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07041619 Genomic DNA No translation available.
AABR07041620 Genomic DNA No translation available.
AABR07041621 Genomic DNA No translation available.
RefSeqiXP_006227598.1, XM_006227536.1
XP_006257604.1, XM_006257542.2
XP_008756778.1, XM_008758556.2
XP_008771764.1, XM_008773542.2

Genome annotation databases

EnsembliENSRNOT00000044435; ENSRNOP00000051158; ENSRNOG00000006797
GeneIDi302812
UCSCiRGD:1564669 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07041619 Genomic DNA No translation available.
AABR07041620 Genomic DNA No translation available.
AABR07041621 Genomic DNA No translation available.
RefSeqiXP_006227598.1, XM_006227536.1
XP_006257604.1, XM_006257542.2
XP_008756778.1, XM_008758556.2
XP_008771764.1, XM_008773542.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051158

Proteomic databases

PaxDbiD3ZZ25
PeptideAtlasiD3ZZ25

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000044435; ENSRNOP00000051158; ENSRNOG00000006797
GeneIDi302812
UCSCiRGD:1564669 rat

Organism-specific databases

CTDi208968
RGDi1564669 Zfp280c

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063300
InParanoidiD3ZZ25
OMAiFYYGRHE
OrthoDBiEOG091G01UE
TreeFamiTF331707

Gene expression databases

BgeeiENSRNOG00000006797 Expressed in 9 organ(s), highest expression level in testis

Family and domain databases

InterProiView protein in InterPro
IPR025243 DUF4195
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF13836 DUF4195, 1 hit
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 9 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZZ25_RAT
AccessioniPrimary (citable) accession number: D3ZZ25
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: September 12, 2018
This is version 59 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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