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Protein
Submitted name:

Snail family transcriptional repressor 3

Gene

Snai3

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Snail family transcriptional repressor 3Imported
Submitted name:
Snail homolog 3 (Drosophila) (Predicted)Imported
Gene namesi
Name:Snai3Imported
Synonyms:Snai3_predictedImported
ORF Names:rCG_51279Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 19

Organism-specific databases

RGDi1309658 Snai3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000013586 Expressed in 8 organ(s), highest expression level in skeletal muscle tissue

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000018387

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini147 – 169C2H2-typeInterPro annotationAdd BLAST23
Domaini178 – 201C2H2-typeInterPro annotationAdd BLAST24
Domaini204 – 231C2H2-typeInterPro annotationAdd BLAST28
Domaini232 – 259C2H2-typeInterPro annotationAdd BLAST28
Domaini260 – 287C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2462 Eukaryota
ENOG41106JS LUCA
GeneTreeiENSGT00390000011027
KOiK09217
OMAiCHKPYHT
OrthoDBiEOG091G0Q0V
TreeFamiTF315515

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits

Sequencei

Sequence statusi: Complete.

D3ZYQ2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPRSFLVKTH SSHRVPNYGK LETLREANGS CSACEELVGS CHLPDKEASS
60 70 80 90 100
NPSDPLQPWD STSAIACVSL PLLPHHGETL GTSGPEPQET SLVGPRAGQA
110 120 130 140 150
PSVTLKDSFN LPPVLVLPTR WPPILGSDGA LDEHLRAEGT SRVPGSFECI
160 170 180 190 200
HCHRPYQTLA GLARHQQLHC HLPTGCAFTC RYCDKEYASL GALKMHIRTH
210 220 230 240 250
TLPCVCKVCG KAFSRPWLLQ GHIRTHTGEK PYTCSHCSRA FADRSNLRAH
260 270 280
LQTHAGTKKY RCALCPKAFS RMSLLVRHED AGCCPGP
Length:287
Mass (Da):31,338
Last modified:April 20, 2010 - v1
Checksum:i8437852F59E7E2C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072659 Genomic DNA No translation available.
CH473972 Genomic DNA Translation: EDL92749.1
RefSeqiNP_001100909.1, NM_001107439.1
XP_008770834.1, XM_008772612.2
UniGeneiRn.127187

Genome annotation databases

EnsembliENSRNOT00000018387; ENSRNOP00000018387; ENSRNOG00000013586
GeneIDi307919
KEGGirno:307919
UCSCiRGD:1309658 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07072659 Genomic DNA No translation available.
CH473972 Genomic DNA Translation: EDL92749.1
RefSeqiNP_001100909.1, NM_001107439.1
XP_008770834.1, XM_008772612.2
UniGeneiRn.127187

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000018387

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000018387; ENSRNOP00000018387; ENSRNOG00000013586
GeneIDi307919
KEGGirno:307919
UCSCiRGD:1309658 rat

Organism-specific databases

CTDi333929
RGDi1309658 Snai3

Phylogenomic databases

eggNOGiKOG2462 Eukaryota
ENOG41106JS LUCA
GeneTreeiENSGT00390000011027
KOiK09217
OMAiCHKPYHT
OrthoDBiEOG091G0Q0V
TreeFamiTF315515

Gene expression databases

BgeeiENSRNOG00000013586 Expressed in 8 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 5 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZYQ2_RAT
AccessioniPrimary (citable) accession number: D3ZYQ2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 10, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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