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Protein
Submitted name:

ZXD family zinc finger C

Gene

Zxdc

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
ZXD family zinc finger CImported
Gene namesi
Name:ZxdcImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1561296 Zxdc

PTM / Processingi

Proteomic databases

PaxDbiD3ZYP0
PRIDEiD3ZYP0

Expressioni

Gene expression databases

BgeeiENSRNOG00000025818 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000032693

Structurei

3D structure databases

ProteinModelPortaliD3ZYP0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini175 – 204C2H2-typeInterPro annotationAdd BLAST30
Domaini208 – 237C2H2-typeInterPro annotationAdd BLAST30
Domaini238 – 267C2H2-typeInterPro annotationAdd BLAST30
Domaini268 – 295C2H2-typeInterPro annotationAdd BLAST28
Domaini297 – 326C2H2-typeInterPro annotationAdd BLAST30
Domaini328 – 357C2H2-typeInterPro annotationAdd BLAST30
Domaini358 – 387C2H2-typeInterPro annotationAdd BLAST30
Domaini388 – 417C2H2-typeInterPro annotationAdd BLAST30
Domaini418 – 447C2H2-typeInterPro annotationAdd BLAST30
Domaini451 – 481C2H2-typeInterPro annotationAdd BLAST31

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144040
InParanoidiD3ZYP0
OMAiHKCEFPG
OrthoDBiEOG091G037W
TreeFamiTF330996

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 10 hits
SUPFAMiSSF57667 SSF57667, 5 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 10 hits
PS50157 ZINC_FINGER_C2H2_2, 10 hits

Sequencei

Sequence statusi: Complete.

D3ZYP0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDLPAVLAAP ATRGDQHGGG PSRLRRGTGP SLGAGPGRRR LLLLRSPEDG
60 70 80 90 100
GPGPRQEEAP GPSPPPPEGG DSFVVLLEVP RAADTHEQEE TEPDSGASPT
110 120 130 140 150
EQVPAAAPGA ALAGTVTIHN QDLLVRFDRG VFTLAAAPAP ATQGLHPATT
160 170 180 190 200
PGLEPSSAAA SRRGPVAASA GSPAYRCPEP QCALSFAKKH QLKVHLLTHG
210 220 230 240 250
SLQGRRPFKC PLDGCGWAFT TSYKLKRHLQ SHDKLRPFSC PVGGCGKKFT
260 270 280 290 300
TVYNLKAHMK GHEQESLFKC EVCAERFPTH AKLNSHQRSH FEPERPYKCD
310 320 330 340 350
FPGCEKTFIT VSALFSHNRA HFREQELFSC SFPGCNKQYD KACRLKIHLR
360 370 380 390 400
SHTGERPFIC DSDSCGWTFT SMSKLLRHKR KHDDDRRFTC PVEGCGKSFT
410 420 430 440 450
RAEHLKGHSI THLGTKPFEC PVEGCCARFS ARSSLYIHSK KHLQDVGTPK
460 470 480 490 500
SRCPVSSCNR LFTSKHSMKA HMVRQHSRRQ DLVPQLEAPS SLTPSSELSS
510 520 530 540 550
PGQSELTNID LAALFSDTPA NSSSSTAGSD EALNSGILTI DVTSVSSSLG
560 570 580 590 600
GNLPTNNNSL GPMDPLVLVA HSDMPPSLDS PLVLGTPATV LQPGSFSADD
610 620 630 640 650
SQAMSTGAVG CLVALPMRNL SQDSPALTPS NNLTALGTTP TSSDTTQETA
660 670 680 690 700
SVPDLLVPIK VEQDLSPVPD VVQGQKESHG PSVLSSSAER LGAQKDSELS
710 720 730 740 750
AGTGSLYLES GGSARTDYRA IQLVKKKKQK GTGSDEGASD SAHRKIKGST
760 770 780 790 800
VSLPHVHSGQ HSCFCGNPMA PSGSLPVPAP AAATQCVQIP VLQDDPSGEG
810 820 830 840 850
GLPLALSPQR SAFHPYFTVD LPVYVLQEVL PAPGGFAGLE AAQVPGSTIN

LQDLQ
Length:855
Mass (Da):90,713
Last modified:April 3, 2013 - v2
Checksum:i4E4F4BE61A60F140
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07061416 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000038244; ENSRNOP00000032693; ENSRNOG00000025818
UCSCiRGD:1561296 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07061416 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliD3ZYP0
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000032693

Proteomic databases

PaxDbiD3ZYP0
PRIDEiD3ZYP0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000038244; ENSRNOP00000032693; ENSRNOG00000025818
UCSCiRGD:1561296 rat

Organism-specific databases

RGDi1561296 Zxdc

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144040
InParanoidiD3ZYP0
OMAiHKCEFPG
OrthoDBiEOG091G037W
TreeFamiTF330996

Gene expression databases

BgeeiENSRNOG00000025818 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 4 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 10 hits
SUPFAMiSSF57667 SSF57667, 5 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 10 hits
PS50157 ZINC_FINGER_C2H2_2, 10 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZYP0_RAT
AccessioniPrimary (citable) accession number: D3ZYP0
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: November 7, 2018
This is version 61 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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