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UniProtKB - D3ZYP0 (D3ZYP0_RAT)
Protein
Submitted name:
ZXD family zinc finger C
Gene
Zxdc
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- C2H2 zinc finger domain binding Source: RGD
- LRR domain binding Source: RGD
- transcription coactivator activity Source: RGD
- transcription coregulator activity Source: GO_Central
GO - Biological processi
- positive regulation of transcription, DNA-templated Source: RGD
- regulation of transcription by RNA polymerase II Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: ZXD family zinc finger CImported |
Gene namesi | Name:ZxdcImported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 1561296, Zxdc |
Expressioni
Gene expression databases
Bgeei | ENSRNOG00000025818, Expressed in skeletal muscle tissue and 19 other tissues |
Interactioni
GO - Molecular functioni
- C2H2 zinc finger domain binding Source: RGD
- LRR domain binding Source: RGD
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000032693 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 175 – 204 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 208 – 237 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 238 – 267 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 268 – 295 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 297 – 326 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 328 – 357 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 358 – 387 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 388 – 417 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 418 – 447 | C2H2-typeInterPro annotationAdd BLAST | 30 | |
Domaini | 451 – 481 | C2H2-typeInterPro annotationAdd BLAST | 31 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 107 | DisorderedSequence analysisAdd BLAST | 107 | |
Regioni | 141 – 162 | DisorderedSequence analysisAdd BLAST | 22 | |
Regioni | 623 – 652 | DisorderedSequence analysisAdd BLAST | 30 | |
Regioni | 671 – 697 | DisorderedSequence analysisAdd BLAST | 27 | |
Regioni | 725 – 744 | DisorderedSequence analysisAdd BLAST | 20 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 678 – 697 | Polar residuesSequence analysisAdd BLAST | 20 | |
Compositional biasi | 725 – 743 | Basic and acidic residuesSequence analysisAdd BLAST | 19 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000162216 |
HOGENOMi | CLU_007312_0_0_1 |
InParanoidi | D3ZYP0 |
OMAi | QCAGSTI |
TreeFami | TF330996 |
Family and domain databases
InterProi | View protein in InterPro IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF00096, zf-C2H2, 4 hits |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 10 hits |
SUPFAMi | SSF57667, SSF57667, 5 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 10 hits PS50157, ZINC_FINGER_C2H2_2, 10 hits |
i Sequence
Sequence statusi: Complete.
D3ZYP0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MDLPAVLAAP ATRGDQHGGG PSRLRRGTGP SLGAGPGRRR LLLLRSPEDG
60 70 80 90 100
GPGPRQEEAP GPSPPPPEGG DSFVVLLEVP RAADTHEQEE TEPDSGASPT
110 120 130 140 150
EQVPAAAPGA ALAGTVTIHN QDLLVRFDRG VFTLAAAPAP ATQGLHPATT
160 170 180 190 200
PGLEPSSAAA SRRGPVAASA GSPAYRCPEP QCALSFAKKH QLKVHLLTHG
210 220 230 240 250
SLQGRRPFKC PLDGCGWAFT TSYKLKRHLQ SHDKLRPFSC PVGGCGKKFT
260 270 280 290 300
TVYNLKAHMK GHEQESLFKC EVCAERFPTH AKLNSHQRSH FEPERPYKCD
310 320 330 340 350
FPGCEKTFIT VSALFSHNRA HFREQELFSC SFPGCNKQYD KACRLKIHLR
360 370 380 390 400
SHTGERPFIC DSDSCGWTFT SMSKLLRHKR KHDDDRRFTC PVEGCGKSFT
410 420 430 440 450
RAEHLKGHSI THLGTKPFEC PVEGCCARFS ARSSLYIHSK KHLQDVGTPK
460 470 480 490 500
SRCPVSSCNR LFTSKHSMKA HMVRQHSRRQ DLVPQLEAPS SLTPSSELSS
510 520 530 540 550
PGQSELTNID LAALFSDTPA NSSSSTAGSD EALNSGILTI DVTSVSSSLG
560 570 580 590 600
GNLPTNNNSL GPMDPLVLVA HSDMPPSLDS PLVLGTPATV LQPGSFSADD
610 620 630 640 650
SQAMSTGAVG CLVALPMRNL SQDSPALTPS NNLTALGTTP TSSDTTQETA
660 670 680 690 700
SVPDLLVPIK VEQDLSPVPD VVQGQKESHG PSVLSSSAER LGAQKDSELS
710 720 730 740 750
AGTGSLYLES GGSARTDYRA IQLVKKKKQK GTGSDEGASD SAHRKIKGST
760 770 780 790 800
VSLPHVHSGQ HSCFCGNPMA PSGSLPVPAP AAATQCVQIP VLQDDPSGEG
810 820 830 840 850
GLPLALSPQR SAFHPYFTVD LPVYVLQEVL PAPGGFAGLE AAQVPGSTIN
LQDLQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07061416 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSRNOT00000038244; ENSRNOP00000032693; ENSRNOG00000025818 |
UCSCi | RGD:1561296, rat |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07061416 Genomic DNA No translation available. |
3D structure databases
SMRi | D3ZYP0 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000032693 |
Proteomic databases
PaxDbi | D3ZYP0 |
Genome annotation databases
Ensembli | ENSRNOT00000038244; ENSRNOP00000032693; ENSRNOG00000025818 |
UCSCi | RGD:1561296, rat |
Organism-specific databases
RGDi | 1561296, Zxdc |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000162216 |
HOGENOMi | CLU_007312_0_0_1 |
InParanoidi | D3ZYP0 |
OMAi | QCAGSTI |
TreeFami | TF330996 |
Gene expression databases
Bgeei | ENSRNOG00000025818, Expressed in skeletal muscle tissue and 19 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF00096, zf-C2H2, 4 hits |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 10 hits |
SUPFAMi | SSF57667, SSF57667, 5 hits |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 10 hits PS50157, ZINC_FINGER_C2H2_2, 10 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | D3ZYP0_RAT | |
Accessioni | D3ZYP0Primary (citable) accession number: D3ZYP0 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 20, 2010 |
Last sequence update: | April 3, 2013 | |
Last modified: | September 29, 2021 | |
This is version 75 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |