Zxdc

Functionⁱ

GO - Molecular functionⁱ

C2H2 zinc finger domain binding Source: Ensembl
DNA-binding transcription factor activity Source: Ensembl
LRR domain binding Source: Ensembl
nucleic acid binding Source: InterPro

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

positive regulation of transcription, DNA-templated Source: Ensembl

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Ligand	Metal-binding, Zinc

Ligand

Metal-binding, Zinc

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: ZXD family zinc finger CImported
Gene namesⁱ	Name:ZxdcImported
Organismⁱ	Rattus norvegicus (Rat)Imported
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentⁱ: Chromosome 4

Organism-specific databases

Rat genome database More...RGDⁱ	1561296 Zxdc

RGDⁱ

1561296 Zxdc

PTM / Processingⁱ

Proteomic databases

PaxDbⁱ	D3ZYP0
PRIDEⁱ	D3ZYP0

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000025818 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Bgeeⁱ

ENSRNOG00000025818 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Interactionⁱ

GO - Molecular functionⁱ

C2H2 zinc finger domain binding Source: Ensembl
LRR domain binding Source: Ensembl

View the complete GO annotation on QuickGO ...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000032693

STRINGⁱ

10116.ENSRNOP00000032693

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	D3ZYP0
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Length
Domainⁱ	175 – 204	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	208 – 237	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	238 – 267	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	268 – 295	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	297 – 326	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	328 – 357	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	358 – 387	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	388 – 417	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	418 – 447	C2H2-typeInterPro annotationAdd BLAST	30
Domainⁱ	451 – 481	C2H2-typeInterPro annotationAdd BLAST	31

Keywords - Domainⁱ

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGⁱ	KOG1721 Eukaryota COG5048 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00910000144040
InParanoidⁱ	D3ZYP0
OMAⁱ	HKCEFPG
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G037W
TreeFamⁱ	TF330996

Family and domain databases

InterProⁱ	View protein in InterPro IPR036236 Znf_C2H2_sf IPR013087 Znf_C2H2_type
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00096 zf-C2H2, 4 hits
SMARTⁱ	View protein in SMART SM00355 ZnF_C2H2, 10 hits
SUPFAMⁱ	SSF57667 SSF57667, 5 hits
PROSITEⁱ	View protein in PROSITE PS00028 ZINC_FINGER_C2H2_1, 10 hits PS50157 ZINC_FINGER_C2H2_2, 10 hits

Sequenceⁱ

Sequence statusⁱ: Complete.

D3ZYP0-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MDLPAVLAAP ATRGDQHGGG PSRLRRGTGP SLGAGPGRRR LLLLRSPEDG 
        60         70         80         90        100
GPGPRQEEAP GPSPPPPEGG DSFVVLLEVP RAADTHEQEE TEPDSGASPT 
       110        120        130        140        150
EQVPAAAPGA ALAGTVTIHN QDLLVRFDRG VFTLAAAPAP ATQGLHPATT 
       160        170        180        190        200
PGLEPSSAAA SRRGPVAASA GSPAYRCPEP QCALSFAKKH QLKVHLLTHG 
       210        220        230        240        250
SLQGRRPFKC PLDGCGWAFT TSYKLKRHLQ SHDKLRPFSC PVGGCGKKFT 
       260        270        280        290        300
TVYNLKAHMK GHEQESLFKC EVCAERFPTH AKLNSHQRSH FEPERPYKCD 
       310        320        330        340        350
FPGCEKTFIT VSALFSHNRA HFREQELFSC SFPGCNKQYD KACRLKIHLR 
       360        370        380        390        400
SHTGERPFIC DSDSCGWTFT SMSKLLRHKR KHDDDRRFTC PVEGCGKSFT 
       410        420        430        440        450
RAEHLKGHSI THLGTKPFEC PVEGCCARFS ARSSLYIHSK KHLQDVGTPK 
       460        470        480        490        500
SRCPVSSCNR LFTSKHSMKA HMVRQHSRRQ DLVPQLEAPS SLTPSSELSS 
       510        520        530        540        550
PGQSELTNID LAALFSDTPA NSSSSTAGSD EALNSGILTI DVTSVSSSLG 
       560        570        580        590        600
GNLPTNNNSL GPMDPLVLVA HSDMPPSLDS PLVLGTPATV LQPGSFSADD 
       610        620        630        640        650
SQAMSTGAVG CLVALPMRNL SQDSPALTPS NNLTALGTTP TSSDTTQETA 
       660        670        680        690        700
SVPDLLVPIK VEQDLSPVPD VVQGQKESHG PSVLSSSAER LGAQKDSELS 
       710        720        730        740        750
AGTGSLYLES GGSARTDYRA IQLVKKKKQK GTGSDEGASD SAHRKIKGST 
       760        770        780        790        800
VSLPHVHSGQ HSCFCGNPMA PSGSLPVPAP AAATQCVQIP VLQDDPSGEG 
       810        820        830        840        850
GLPLALSPQR SAFHPYFTVD LPVYVLQEVL PAPGGFAGLE AAQVPGSTIN 

LQDLQ

Length:855

Mass (Da):90,713

Last modified:April 3, 2013 - v2

Checksum:ⁱ4E4F4BE61A60F140

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07061416 Genomic DNA No translation available.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AABR07061416 Genomic DNA No translation available.

Genome annotation databases

Ensemblⁱ	ENSRNOT00000038244; ENSRNOP00000032693; ENSRNOG00000025818
UCSC genome browser More...UCSCⁱ	RGD:1561296 rat

Protein	Similar proteins		Species	Score	Length	Source
D3ZYP0	Isoform 2 of Zinc finger protein ZXDC		MOUSE		712	UniRef90_Q8C8V1-2
UPI0003D08907		RAT		878
UPI000B4E909F		MERUN		843
UPI0003D0B5D5		RAT		872

Protein	Similar proteins		Species	Score	Length	Source
D3ZYP0	Isoform 2 of Zinc finger protein ZXDC		HUMAN		710	UniRef50_Q2QGD7-2
ZXD family zinc finger C		PONAB		881
ZXD family zinc finger C		PANTR		710
Zinc finger protein ZXDC isoform 2		MACMU		710
Zinc finger protein ZXDC isoform 2		CALJA		709
+79

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07061416 Genomic DNA No translation available.

Select the link destinations:
EMBLⁱ
GenBankⁱ
DDBJⁱ

Links Updated

AABR07061416 Genomic DNA No translation available.

3D structure databases

ProteinModelPortalⁱ	D3ZYP0
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000032693

STRINGⁱ

10116.ENSRNOP00000032693

Proteomic databases

PaxDbⁱ	D3ZYP0
PRIDEⁱ	D3ZYP0

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000038244; ENSRNOP00000032693; ENSRNOG00000025818
UCSCⁱ	RGD:1561296 rat

Organism-specific databases

RGDⁱ	1561296 Zxdc

Phylogenomic databases

eggNOGⁱ	KOG1721 Eukaryota COG5048 LUCA
GeneTreeⁱ	ENSGT00910000144040
InParanoidⁱ	D3ZYP0
OMAⁱ	HKCEFPG
OrthoDBⁱ	EOG091G037W
TreeFamⁱ	TF330996

Gene expression databases

Bgeeⁱ	ENSRNOG00000025818 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Bgeeⁱ

ENSRNOG00000025818 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

InterProⁱ	View protein in InterPro IPR036236 Znf_C2H2_sf IPR013087 Znf_C2H2_type
Pfamⁱ	View protein in Pfam PF00096 zf-C2H2, 4 hits
SMARTⁱ	View protein in SMART SM00355 ZnF_C2H2, 10 hits
SUPFAMⁱ	SSF57667 SSF57667, 5 hits
PROSITEⁱ	View protein in PROSITE PS00028 ZINC_FINGER_C2H2_1, 10 hits PS50157 ZINC_FINGER_C2H2_2, 10 hits
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	D3ZYP0_RAT
Accessionⁱ	D3ZYP0Primary (citable) accession number: D3ZYP0
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	April 20, 2010
	Last sequence update:	April 3, 2013
	Last modified:	November 7, 2018
	This is version 61 of the entry and version 2 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - D3ZYP0 (D3ZYP0_RAT)

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ZXD family zinc finger C

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Keywords - Domaini

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

GO - Molecular functionⁱ

Structureⁱ

Family & Domainsⁱ

Keywords - Domainⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ