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Protein
Submitted name:

Mesogenin 1

Gene

Msgn1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Mesogenin 1Imported
Submitted name:
RCG62342Imported
Gene namesi
Name:Msgn1Imported
ORF Names:rCG_62342Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi1587516 Msgn1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000028518

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006482

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini118 – 172BHLHInterPro annotationAdd BLAST55

Phylogenomic databases

eggNOGiKOG4029 Eukaryota
ENOG411227D LUCA
GeneTreeiENSGT00530000063712
KOiK09077
OMAiSSWDWKN
OrthoDBiEOG091G0N6N
TreeFamiTF325707

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZVR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNLGETFLS LEDGLDSSDT TGLLASWDWK SRARPLELIQ ASPTQSLSPV
60 70 80 90 100
PSLESYSEVA LPCGHSGAST GGSDGYSSHE AGGLVELDYS MLAFQPSYIH
110 120 130 140 150
AAGGLKGQKG SKVKMSVQRR RKASEREKLR MRTLADALHT LRNYLPPVYS
160 170 180
QRGQPLTKIQ TLKYTIKYIR ELTDLLNGGR EPRPQSV
Length:187
Mass (Da):20,525
Last modified:April 20, 2010 - v1
Checksum:i7A0E8F99F4727CFE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07063601 Genomic DNA No translation available.
CH473947 Genomic DNA Translation: EDM03098.1
RefSeqiNP_001103021.1, NM_001109551.1
UniGeneiRn.21210

Genome annotation databases

EnsembliENSRNOT00000006482; ENSRNOP00000006482; ENSRNOG00000028518
GeneIDi689864
KEGGirno:689864

Similar proteinsi

Entry informationi

Entry nameiD3ZVR2_RAT
AccessioniPrimary (citable) accession number: D3ZVR2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: May 23, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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