Klf13

Functionⁱ

GO - Molecular functionⁱ

DNA-binding transcription factor activity, RNA polymerase II-specific
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635
nucleic acid binding Source: InterPro

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

regulation of transcription by RNA polymerase II
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Ligand	Metal-binding, Zinc

Ligand

Metal-binding, Zinc

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Kruppel-like factor 13Imported Submitted name: Similar to BTEB3 protein (Predicted), isoform CRA_aImported
Gene namesⁱ	Name:Klf13Imported Synonyms:RGD1565099_predictedImported ORF Names:rCG_24700Imported
Organismⁱ	Rattus norvegicus (Rat)Imported
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentⁱ: Chromosome 1

Organism-specific databases

Rat genome database More...RGDⁱ	1565099 Klf13

RGDⁱ

1565099 Klf13

Subcellular locationⁱ

GO - Cellular component

PTM / Processingⁱ

Proteomic databases

PRIDEⁱ	D3ZVI8

PRIDEⁱ

D3ZVI8

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000015822 Expressed in 10 organ(s), highest expression level in brain

Bgeeⁱ

ENSRNOG00000015822 Expressed in 10 organ(s), highest expression level in brain

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000063436

STRINGⁱ

10116.ENSRNOP00000063436

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	40 – 69	C2H2-typeInterPro annotationAdd BLAST		30
Domainⁱ	70 – 97	C2H2-typeInterPro annotationAdd BLAST		28

Keywords - Domainⁱ

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGⁱ	KOG1721 Eukaryota COG5048 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00760000118984
KEGG Orthology (KO) More...KOⁱ	K09208
OMAⁱ	MAYTCER
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G13BV

Family and domain databases

InterProⁱ	View protein in InterPro IPR036236 Znf_C2H2_sf IPR013087 Znf_C2H2_type
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00096 zf-C2H2, 2 hits
SMARTⁱ	View protein in SMART SM00355 ZnF_C2H2, 2 hits
SUPFAMⁱ	SSF57667 SSF57667, 1 hit
PROSITEⁱ	View protein in PROSITE PS00028 ZINC_FINGER_C2H2_1, 2 hits PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequenceⁱ

Sequence statusⁱ: Complete.

D3ZVI8-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MSGHNSTFPG TPGLPGSLLC LTVGHFIYPC PNREPGERPF ACSWQECNKK 
        60         70         80         90        100
FARSDELARH YRTHTGEKKF SCPICEKRFM RSDHLTKHAR RHANFHPGML 
       110        120        130 
QRRGGGSRTG SLSDYSRSDA SSPTISPASS P

Length:131

Mass (Da):14,561

Last modified:April 20, 2010 - v1

Checksum:ⁱCD54CE371EAD3EE4

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07004100 Genomic DNA No translation available. CH473980 Genomic DNA Translation: EDM08377.1
NCBI Reference Sequences More...RefSeqⁱ	NP_001102617.1, NM_001109147.1
UniGeneⁱ	Rn.22229

Genome annotation databases

Ensemblⁱ	ENSRNOT00000066380; ENSRNOP00000063436; ENSRNOG00000015822
GeneIDⁱ	499171
KEGGⁱ	rno:499171

Protein	Similar proteins		Species	Score	Length	Source
D3ZVI8	Krueppel-like factor 13		HUMAN		100	UniRef90_D3ZVI8
KLF13 isoform 3		PANTR		100
Uncharacterized protein		SAIBB		100
Uncharacterized protein		CALJA		100
Uncharacterized protein		COLAP		100
+9

Protein	Similar proteins		Species	Score	Length	Source
D3ZVI8	Krueppel-like factor 13		HUMAN		100	UniRef50_D3ZVI8
KLF13 isoform 3		PANTR		100
Uncharacterized protein		SAIBB		100
Uncharacterized protein		CALJA		100
Uncharacterized protein		COLAP		100
+55

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07004100 Genomic DNA No translation available. CH473980 Genomic DNA Translation: EDM08377.1
RefSeqⁱ	NP_001102617.1, NM_001109147.1
UniGeneⁱ	Rn.22229

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000063436

STRINGⁱ

10116.ENSRNOP00000063436

Proteomic databases

PRIDEⁱ	D3ZVI8

PRIDEⁱ

D3ZVI8

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000066380; ENSRNOP00000063436; ENSRNOG00000015822
GeneIDⁱ	499171
KEGGⁱ	rno:499171

Organism-specific databases

CTDⁱ	51621
RGDⁱ	1565099 Klf13

Phylogenomic databases

eggNOGⁱ	KOG1721 Eukaryota COG5048 LUCA
GeneTreeⁱ	ENSGT00760000118984
KOⁱ	K09208
OMAⁱ	MAYTCER
OrthoDBⁱ	EOG091G13BV

Gene expression databases

Bgeeⁱ	ENSRNOG00000015822 Expressed in 10 organ(s), highest expression level in brain

Bgeeⁱ

ENSRNOG00000015822 Expressed in 10 organ(s), highest expression level in brain

Family and domain databases

InterProⁱ	View protein in InterPro IPR036236 Znf_C2H2_sf IPR013087 Znf_C2H2_type
Pfamⁱ	View protein in Pfam PF00096 zf-C2H2, 2 hits
SMARTⁱ	View protein in SMART SM00355 ZnF_C2H2, 2 hits
SUPFAMⁱ	SSF57667 SSF57667, 1 hit
PROSITEⁱ	View protein in PROSITE PS00028 ZINC_FINGER_C2H2_1, 2 hits PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	D3ZVI8_RAT
Accessionⁱ	D3ZVI8Primary (citable) accession number: D3ZVI8
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	April 20, 2010
	Last sequence update:	April 20, 2010
	Last modified:	November 7, 2018
	This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - D3ZVI8 (D3ZVI8_RAT)

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Kruppel-like factor 13

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Keywords - Domaini

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

Family & Domainsⁱ

Keywords - Domainⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ