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Protein
Submitted name:

Kruppel-like factor 13

Gene

Klf13

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
  • nucleic acid binding Source: InterPro

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Kruppel-like factor 13Imported
Submitted name:
Similar to BTEB3 protein (Predicted), isoform CRA_aImported
Gene namesi
Name:Klf13Imported
Synonyms:RGD1565099_predictedImported
ORF Names:rCG_24700Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1565099 Klf13

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZVI8

Expressioni

Gene expression databases

BgeeiENSRNOG00000015822 Expressed in 10 organ(s), highest expression level in brain

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063436

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini40 – 69C2H2-typeInterPro annotationAdd BLAST30
Domaini70 – 97C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
KOiK09208
OMAiMAYTCER
OrthoDBiEOG091G13BV

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequencei

Sequence statusi: Complete.

D3ZVI8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSGHNSTFPG TPGLPGSLLC LTVGHFIYPC PNREPGERPF ACSWQECNKK
60 70 80 90 100
FARSDELARH YRTHTGEKKF SCPICEKRFM RSDHLTKHAR RHANFHPGML
110 120 130
QRRGGGSRTG SLSDYSRSDA SSPTISPASS P
Length:131
Mass (Da):14,561
Last modified:April 20, 2010 - v1
Checksum:iCD54CE371EAD3EE4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07004100 Genomic DNA No translation available.
CH473980 Genomic DNA Translation: EDM08377.1
RefSeqiNP_001102617.1, NM_001109147.1
UniGeneiRn.22229

Genome annotation databases

EnsembliENSRNOT00000066380; ENSRNOP00000063436; ENSRNOG00000015822
GeneIDi499171
KEGGirno:499171

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07004100 Genomic DNA No translation available.
CH473980 Genomic DNA Translation: EDM08377.1
RefSeqiNP_001102617.1, NM_001109147.1
UniGeneiRn.22229

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063436

Proteomic databases

PRIDEiD3ZVI8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000066380; ENSRNOP00000063436; ENSRNOG00000015822
GeneIDi499171
KEGGirno:499171

Organism-specific databases

CTDi51621
RGDi1565099 Klf13

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
KOiK09208
OMAiMAYTCER
OrthoDBiEOG091G13BV

Gene expression databases

BgeeiENSRNOG00000015822 Expressed in 10 organ(s), highest expression level in brain

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZVI8_RAT
AccessioniPrimary (citable) accession number: D3ZVI8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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