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UniProtKB - D3ZV33 (D3ZV33_RAT)
Protein
Submitted name:
Pogo transposable element with ZNF domain (Predicted), isoform CRA_a
Gene
Pogz
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- nucleic acid binding Source: InterPro
GO - Biological processi
- kinetochore assembly Source: RGD
- mitotic sister chromatid cohesion Source: RGD
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Pogo transposable element with ZNF domain (Predicted), isoform CRA_aImportedSubmitted name: Pogo transposable element-derived with ZNF domainImported |
Gene namesi | ORF Names:rCG_51791Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 1309980, Pogz |
Subcellular locationi
Expressioni
Gene expression databases
Bgeei | ENSRNOG00000053599, Expressed in thymus and 21 other tissues |
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 438 – 465 | C2H2-typeInterPro annotationAdd BLAST | 28 | |
Domaini | 474 – 502 | C2H2-typeInterPro annotationAdd BLAST | 29 | |
Domaini | 959 – 1029 | HTH CENPB-typeInterPro annotationAdd BLAST | 71 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 185 – 239 | DisorderedSequence analysisAdd BLAST | 55 | |
Regioni | 279 – 305 | DisorderedSequence analysisAdd BLAST | 27 | |
Regioni | 356 – 402 | DisorderedSequence analysisAdd BLAST | 47 | |
Regioni | 815 – 838 | DisorderedSequence analysisAdd BLAST | 24 | |
Regioni | 851 – 913 | DisorderedSequence analysisAdd BLAST | 63 | |
Regioni | 1304 – 1357 | DisorderedSequence analysisAdd BLAST | 54 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 185 – 233 | Polar residuesSequence analysisAdd BLAST | 49 | |
Compositional biasi | 857 – 871 | Pro residuesSequence analysisAdd BLAST | 15 | |
Compositional biasi | 881 – 895 | Polar residuesSequence analysisAdd BLAST | 15 | |
Compositional biasi | 1312 – 1336 | Basic and acidic residuesSequence analysisAdd BLAST | 25 | |
Compositional biasi | 1342 – 1357 | Acidic residuesSequence analysisAdd BLAST | 16 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
eggNOGi | KOG1721, Eukaryota KOG3105, Eukaryota |
GeneTreei | ENSGT00940000160649 |
OMAi | PRCDAQF |
Family and domain databases
InterProi | View protein in InterPro IPR004875, DDE_SF_endonuclease_dom IPR009057, Homeobox-like_sf IPR006600, HTH_CenpB_DNA-bd_dom IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF03184, DDE_1, 1 hit PF03221, HTH_Tnp_Tc5, 1 hit |
SMARTi | View protein in SMART SM00674, CENPB, 1 hit SM00355, ZnF_C2H2, 8 hits |
SUPFAMi | SSF46689, SSF46689, 1 hit SSF57667, SSF57667, 1 hit |
PROSITEi | View protein in PROSITE PS51253, HTH_CENPB, 1 hit PS00028, ZINC_FINGER_C2H2_1, 5 hits PS50157, ZINC_FINGER_C2H2_2, 2 hits |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
D3ZV33-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MADTDLFMEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT PAGNTLVQQG
60 70 80 90 100
GQPLILTQNP TPGLGTMVTQ PVLRPVQVMQ NANHVTSSPV ASQPIFITTQ
110 120 130 140 150
GFPVRNVRPV QNAMNQVGIV LNVQQGQTVR PITLVPAPGT QFVKPTVGVP
160 170 180 190 200
QVFSQMTPVR PGSTMPVRPT TNTFTTVIPA TLTIRSTVPQ SQSQQTKSTP
210 220 230 240 250
STSTTPIATQ PTALGQLAGQ PPGQPNQTSN PKLAPSFPSP PAVSIASFVT
260 270 280 290 300
VKRPGVTGEN SNEVAKLVNT LNTIPSLGQS PGPVVVSNNS SAQRTSGPES
310 320 330 340 350
SMKVTSSIPV FDLQDGGRKI CPRCNAQFRV TEALRGHMCY CCPEMVEYQK
360 370 380 390 400
KGKSLDAEPS VPSAAKPASP EKTAPVTSTP SSTPIPALSP PTKVPEPSES
410 420 430 440 450
AGDTVQTKLI MLVDDFYYGR DGGKAAQLTS FPKVATSFRC PHCTKRLKNN
460 470 480 490 500
IRFMNHMKHH VELDQQNGEV DGHTICQHCY RQFSTPFQLQ CHLENVHSPY
510 520 530 540 550
ESTTKCKICE WAFESEPLFL QHMKDTHKPG EMPYVCQVCQ YRSSLYSEVD
560 570 580 590 600
VHFRMIHEDT RHLLCPYCLK VFKNGNAFQQ HYMRHQKRNV YHCNKCRLQF
610 620 630 640 650
LFAKDKIEHK LQHHKTFRKP KQLEGLKPGT KVTIRASRGQ PRTVPVSSND
660 670 680 690 700
APSGALQEAA PLTSADPLPV FLYPPVQRNV QKRAVRKMSV MGRQTCLECS
710 720 730 740 750
FEIPDFPNHF PTYVHCSLCR YSTCCSRAYA NHMINNHVPR KSPKYLALFK
760 770 780 790 800
NFVSGIKLAC TSCTFATSVG DAMAKHLVFN PSHRSSNILP RGLSWMSYSR
810 820 830 840 850
LGQTPERVLD RSMKNTYLPP PLLPNKAATV KPVGATSAEP QELAGPVLQA
860 870 880 890 900
LPSPASTATP PATPTHPQPS ALPPLATEGT ECLNVNEQEE GSPVTQEPEP
910 920 930 940 950
ASGAGSGGSG VGKKEQLSVK KLRVVLFALC CNTEQAAEHF RNPQRRIRRW
960 970 980 990 1000
LRRFQASQGE NLEGKYLSFE AEEKLAEWVL IQREQQLPVN EETLFQKATK
1010 1020 1030 1040 1050
IGRSLEGGFK ISYEWAVRFM LRHHLTPHAR RAVAHTLPKH VAENAGLFIE
1060 1070 1080 1090 1100
FVQRQIHNQD LPLSMIVAID EISLFLDTEV LSSDDRKENA LQTVGTGEPW
1110 1120 1130 1140 1150
CDVVLAILAD GTVLPTLVFF RGQANRLANV PDSILLEAKD SGYSDDEIME
1160 1170 1180 1190 1200
LWSTRVWKKH TACQHSKSML VMDCHRTHLS EEVLALLSAS STLPAVVPAG
1210 1220 1230 1240 1250
CSSKIQPLDV CIKRTVKNFL HKKWKEQARE MADAACDSDV LLQLVLVWLG
1260 1270 1280 1290 1300
EVLSVIGDSP DLVQRSFLVA SVLPGPDGNV NSPTRNADMQ EELIASLEEQ
1310 1320 1330 1340 1350
LKLNGEQSEE HSASAPRPRS SPEETVEPES LHQLFEGESE TESFYGFEEA
DLDLMEI
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A0G2JY58 | A0A0G2JY58_RAT | Pogo transposable element-derived w... | Pogz | 1,410 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07012474 Genomic DNA No translation available. AABR07012475 Genomic DNA No translation available. AABR07072762 Genomic DNA No translation available. AC130969 Genomic DNA No translation available. CH474015 Genomic DNA Translation: EDL85769.1 |
RefSeqi | XP_008759519.1, XM_008761297.2 |
Genome annotation databases
Ensembli | ENSRNOT00000084023; ENSRNOP00000070100; ENSRNOG00000053599 |
GeneIDi | 310658 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AABR07012474 Genomic DNA No translation available. AABR07012475 Genomic DNA No translation available. AABR07072762 Genomic DNA No translation available. AC130969 Genomic DNA No translation available. CH474015 Genomic DNA Translation: EDL85769.1 |
RefSeqi | XP_008759519.1, XM_008761297.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000063205 |
Genome annotation databases
Ensembli | ENSRNOT00000084023; ENSRNOP00000070100; ENSRNOG00000053599 |
GeneIDi | 310658 |
Organism-specific databases
CTDi | 23126 |
RGDi | 1309980, Pogz |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota KOG3105, Eukaryota |
GeneTreei | ENSGT00940000160649 |
OMAi | PRCDAQF |
Gene expression databases
Bgeei | ENSRNOG00000053599, Expressed in thymus and 21 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR004875, DDE_SF_endonuclease_dom IPR009057, Homeobox-like_sf IPR006600, HTH_CenpB_DNA-bd_dom IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF03184, DDE_1, 1 hit PF03221, HTH_Tnp_Tc5, 1 hit |
SMARTi | View protein in SMART SM00674, CENPB, 1 hit SM00355, ZnF_C2H2, 8 hits |
SUPFAMi | SSF46689, SSF46689, 1 hit SSF57667, SSF57667, 1 hit |
PROSITEi | View protein in PROSITE PS51253, HTH_CENPB, 1 hit PS00028, ZINC_FINGER_C2H2_1, 5 hits PS50157, ZINC_FINGER_C2H2_2, 2 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | D3ZV33_RAT | |
Accessioni | D3ZV33Primary (citable) accession number: D3ZV33 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 20, 2010 |
Last sequence update: | April 20, 2010 | |
Last modified: | January 19, 2022 | |
This is version 84 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |