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Protein
Submitted name:

Pogo transposable element with ZNF domain (Predicted), isoform CRA_a

Gene

Pogz

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Pogo transposable element with ZNF domain (Predicted), isoform CRA_aImported
Submitted name:
Pogo transposable element-derived with ZNF domainImported
Gene namesi
Name:PogzImported
Synonyms:Pogz_predictedImported
ORF Names:rCG_51791Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 2

Organism-specific databases

RGDi1309980 Pogz

PTM / Processingi

Proteomic databases

PRIDEiD3ZV33

Expressioni

Gene expression databases

BgeeiENSRNOG00000053599 Expressed in 10 organ(s), highest expression level in skeletal muscle tissue
ExpressionAtlasiD3ZV33 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063205

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini438 – 465C2H2-typeInterPro annotationAdd BLAST28
Domaini474 – 502C2H2-typeInterPro annotationAdd BLAST29
Domaini959 – 1029HTH CENPB-typeInterPro annotationAdd BLAST71

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
KOG3105 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063300

Family and domain databases

InterProiView protein in InterPro
IPR004875 DDE_SF_endonuclease_dom
IPR009057 Homeobox-like_sf
IPR006600 HTH_CenpB_DNA-bd_dom
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF03184 DDE_1, 1 hit
PF03221 HTH_Tnp_Tc5, 1 hit
SMARTiView protein in SMART
SM00674 CENPB, 1 hit
SM00355 ZnF_C2H2, 8 hits
SUPFAMiSSF46689 SSF46689, 1 hit
SSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS51253 HTH_CENPB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 5 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZV33-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MADTDLFMEC EEEELEPWQK ISDVIEDSVV EDYNSVDKTT PAGNTLVQQG
60 70 80 90 100
GQPLILTQNP TPGLGTMVTQ PVLRPVQVMQ NANHVTSSPV ASQPIFITTQ
110 120 130 140 150
GFPVRNVRPV QNAMNQVGIV LNVQQGQTVR PITLVPAPGT QFVKPTVGVP
160 170 180 190 200
QVFSQMTPVR PGSTMPVRPT TNTFTTVIPA TLTIRSTVPQ SQSQQTKSTP
210 220 230 240 250
STSTTPIATQ PTALGQLAGQ PPGQPNQTSN PKLAPSFPSP PAVSIASFVT
260 270 280 290 300
VKRPGVTGEN SNEVAKLVNT LNTIPSLGQS PGPVVVSNNS SAQRTSGPES
310 320 330 340 350
SMKVTSSIPV FDLQDGGRKI CPRCNAQFRV TEALRGHMCY CCPEMVEYQK
360 370 380 390 400
KGKSLDAEPS VPSAAKPASP EKTAPVTSTP SSTPIPALSP PTKVPEPSES
410 420 430 440 450
AGDTVQTKLI MLVDDFYYGR DGGKAAQLTS FPKVATSFRC PHCTKRLKNN
460 470 480 490 500
IRFMNHMKHH VELDQQNGEV DGHTICQHCY RQFSTPFQLQ CHLENVHSPY
510 520 530 540 550
ESTTKCKICE WAFESEPLFL QHMKDTHKPG EMPYVCQVCQ YRSSLYSEVD
560 570 580 590 600
VHFRMIHEDT RHLLCPYCLK VFKNGNAFQQ HYMRHQKRNV YHCNKCRLQF
610 620 630 640 650
LFAKDKIEHK LQHHKTFRKP KQLEGLKPGT KVTIRASRGQ PRTVPVSSND
660 670 680 690 700
APSGALQEAA PLTSADPLPV FLYPPVQRNV QKRAVRKMSV MGRQTCLECS
710 720 730 740 750
FEIPDFPNHF PTYVHCSLCR YSTCCSRAYA NHMINNHVPR KSPKYLALFK
760 770 780 790 800
NFVSGIKLAC TSCTFATSVG DAMAKHLVFN PSHRSSNILP RGLSWMSYSR
810 820 830 840 850
LGQTPERVLD RSMKNTYLPP PLLPNKAATV KPVGATSAEP QELAGPVLQA
860 870 880 890 900
LPSPASTATP PATPTHPQPS ALPPLATEGT ECLNVNEQEE GSPVTQEPEP
910 920 930 940 950
ASGAGSGGSG VGKKEQLSVK KLRVVLFALC CNTEQAAEHF RNPQRRIRRW
960 970 980 990 1000
LRRFQASQGE NLEGKYLSFE AEEKLAEWVL IQREQQLPVN EETLFQKATK
1010 1020 1030 1040 1050
IGRSLEGGFK ISYEWAVRFM LRHHLTPHAR RAVAHTLPKH VAENAGLFIE
1060 1070 1080 1090 1100
FVQRQIHNQD LPLSMIVAID EISLFLDTEV LSSDDRKENA LQTVGTGEPW
1110 1120 1130 1140 1150
CDVVLAILAD GTVLPTLVFF RGQANRLANV PDSILLEAKD SGYSDDEIME
1160 1170 1180 1190 1200
LWSTRVWKKH TACQHSKSML VMDCHRTHLS EEVLALLSAS STLPAVVPAG
1210 1220 1230 1240 1250
CSSKIQPLDV CIKRTVKNFL HKKWKEQARE MADAACDSDV LLQLVLVWLG
1260 1270 1280 1290 1300
EVLSVIGDSP DLVQRSFLVA SVLPGPDGNV NSPTRNADMQ EELIASLEEQ
1310 1320 1330 1340 1350
LKLNGEQSEE HSASAPRPRS SPEETVEPES LHQLFEGESE TESFYGFEEA

DLDLMEI
Length:1,357
Mass (Da):149,852
Last modified:April 20, 2010 - v1
Checksum:iD2F93D465CEC36CD
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2JY58A0A0G2JY58_RAT
Pogo transposable element-derived w...
Pogz
1,410Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07012474 Genomic DNA No translation available.
AABR07012475 Genomic DNA No translation available.
AABR07072762 Genomic DNA No translation available.
AC130969 Genomic DNA No translation available.
CH474015 Genomic DNA Translation: EDL85769.1
RefSeqiXP_008759519.1, XM_008761297.2
UniGeneiRn.103975

Genome annotation databases

EnsembliENSRNOT00000084023; ENSRNOP00000070100; ENSRNOG00000053599
GeneIDi310658

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07012474 Genomic DNA No translation available.
AABR07012475 Genomic DNA No translation available.
AABR07072762 Genomic DNA No translation available.
AC130969 Genomic DNA No translation available.
CH474015 Genomic DNA Translation: EDL85769.1
RefSeqiXP_008759519.1, XM_008761297.2
UniGeneiRn.103975

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000063205

Proteomic databases

PRIDEiD3ZV33

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000084023; ENSRNOP00000070100; ENSRNOG00000053599
GeneIDi310658

Organism-specific databases

CTDi23126
RGDi1309980 Pogz

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
KOG3105 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00530000063300

Gene expression databases

BgeeiENSRNOG00000053599 Expressed in 10 organ(s), highest expression level in skeletal muscle tissue
ExpressionAtlasiD3ZV33 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR004875 DDE_SF_endonuclease_dom
IPR009057 Homeobox-like_sf
IPR006600 HTH_CenpB_DNA-bd_dom
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF03184 DDE_1, 1 hit
PF03221 HTH_Tnp_Tc5, 1 hit
SMARTiView protein in SMART
SM00674 CENPB, 1 hit
SM00355 ZnF_C2H2, 8 hits
SUPFAMiSSF46689 SSF46689, 1 hit
SSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS51253 HTH_CENPB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 5 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZV33_RAT
AccessioniPrimary (citable) accession number: D3ZV33
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 68 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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