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Protein
Submitted name:

Zinc finger protein 354B

Gene

Znf354b

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-RNO-212436 Generic Transcription Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger protein 354BImported
Gene namesi
Name:Znf354bImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi7562538 Znf354b

PTM / Processingi

Proteomic databases

PaxDbiD3ZUE7

Expressioni

Gene expression databases

BgeeiENSRNOG00000029678 Expressed in 9 organ(s), highest expression level in liver

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004902

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini145 – 172C2H2-typeInterPro annotationAdd BLAST28
Domaini173 – 200C2H2-typeInterPro annotationAdd BLAST28
Domaini201 – 228C2H2-typeInterPro annotationAdd BLAST28
Domaini229 – 256C2H2-typeInterPro annotationAdd BLAST28
Domaini282 – 309C2H2-typeInterPro annotationAdd BLAST28
Domaini310 – 337C2H2-typeInterPro annotationAdd BLAST28
Domaini338 – 365C2H2-typeInterPro annotationAdd BLAST28
Domaini366 – 393C2H2-typeInterPro annotationAdd BLAST28
Domaini394 – 421C2H2-typeInterPro annotationAdd BLAST28
Domaini422 – 449C2H2-typeInterPro annotationAdd BLAST28
Domaini450 – 477C2H2-typeInterPro annotationAdd BLAST28
Domaini478 – 505C2H2-typeInterPro annotationAdd BLAST28
Domaini506 – 533C2H2-typeInterPro annotationAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144148
InParanoidiD3ZUE7
OMAiCEIQRNS
OrthoDBiEOG091G02KC
TreeFamiTF350822

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 12 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF57667 SSF57667, 8 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 13 hits
PS50157 ZINC_FINGER_C2H2_2, 13 hits

Sequencei

Sequence statusi: Complete.

D3ZUE7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MISVLQQGEE PWKAEKESHG CSSLGCNSSL QTTKSTQTKE SSFQELKRKQ
60 70 80 90 100
LKRDEDWDFT SGKSCRPDNS FKKQNKNESL QIISITHTKI LTVDKSHKNF
110 120 130 140 150
EFGPSVSLKS ISKQKIAREK TQRNSLKENS TSLNQPKIKT LEKRFKCSTC
160 170 180 190 200
EKAFIHSSSL RKHLKNHSGE RLFQCKDCLK AFSQSSALIQ HQRTHTGEKP
210 220 230 240 250
YICNECGKAF SHSASLCKHL RTHTLEKSYT CKECGKSFSR RSSLFLHQKI
260 270 280 290 300
HARENPHRYN PGRKASASLS GCQRAHSRKK TYLCNECGNT FKSSSSLRYH
310 320 330 340 350
QRIHTGEKPF RCSECGRAFS QSASLIQHER IHTGEKPYRC GECGKGFTSI
360 370 380 390 400
SRLNRHRIIH TGEKLYNCNE CGKALSSHST LIIHERIHTG EKPCKCKVCG
410 420 430 440 450
KAFRQSSALI QHQRMHTGER PYKCNECGKT FRCNSSLSNH QRIHTGEKPY
460 470 480 490 500
QCIECGMSFG QSAALIQHQR IHTGEKPFKC NTCGRSFRQS SSLIAHQRIH
510 520 530 540
TGEKPYECSA CGKLFSQRSS LTNHYKIHIE EDSLNIDLHE
Length:540
Mass (Da):61,589
Last modified:July 22, 2015 - v2
Checksum:i60F3B303E33E759F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC115666 Genomic DNA No translation available.
RefSeqiXP_017453114.1, XM_017597625.1
XP_017459532.1, XM_017604043.1

Genome annotation databases

EnsembliENSRNOT00000004902; ENSRNOP00000004902; ENSRNOG00000029678
GeneIDi102556119

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC115666 Genomic DNA No translation available.
RefSeqiXP_017453114.1, XM_017597625.1
XP_017459532.1, XM_017604043.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004902

Proteomic databases

PaxDbiD3ZUE7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000004902; ENSRNOP00000004902; ENSRNOG00000029678
GeneIDi102556119

Organism-specific databases

CTDi117608
RGDi7562538 Znf354b

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144148
InParanoidiD3ZUE7
OMAiCEIQRNS
OrthoDBiEOG091G02KC
TreeFamiTF350822

Enzyme and pathway databases

ReactomeiR-RNO-212436 Generic Transcription Pathway

Gene expression databases

BgeeiENSRNOG00000029678 Expressed in 9 organ(s), highest expression level in liver

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 12 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 13 hits
SUPFAMiSSF57667 SSF57667, 8 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 13 hits
PS50157 ZINC_FINGER_C2H2_2, 13 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZUE7_RAT
AccessioniPrimary (citable) accession number: D3ZUE7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: October 10, 2018
This is version 75 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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