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Protein
Submitted name:

RCG50292, isoform CRA_a

Gene

Tmem59

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RCG50292, isoform CRA_aImported
Submitted name:
Transmembrane protein 59Imported
Gene namesi
Name:Tmem59Imported
Synonyms:RGD1310313Imported
ORF Names:rCG_50292Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1310313 Tmem59

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei240 – 265HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_501528782235 – 323Sequence analysisAdd BLAST289

Proteomic databases

PRIDEiD3ZTP3

Expressioni

Gene expression databases

BgeeiENSRNOG00000009778 Expressed in 10 organ(s), highest expression level in lung

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000013224

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IIST Eukaryota
ENOG410XTCW LUCA
GeneTreeiENSGT00390000008279
OMAiQEPTNLK
OrthoDBiEOG091G0EVN
TreeFamiTF331226

Family and domain databases

InterProiView protein in InterPro
IPR022065 Uncharacterised_TMEM59
PANTHERiPTHR28652 PTHR28652, 1 hit
PfamiView protein in Pfam
PF12280 BSMAP, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZTP3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAPKGKLWV QAQVGLPPLL LLTMALAGGS GTAAAEAFDS VLGDTASCHR
60 70 80 90 100
ACQLTYPLHT YPKEEELYAC QRGCRLFSIC QFVDDGIDLN RTKLECESAC
110 120 130 140 150
TEAYSQPDEQ YACHLGCQDQ LPFAELRQEQ LMSLMPRMHL LFPLTLVRSF
160 170 180 190 200
WSDMMDSAQS FITSSWTFYL QADDGKIVIF QSKPEIQYAP QLEQEPADLR
210 220 230 240 250
QSSLSKMSYL QMRNSQAHRN YLEDEESDGF LRCLSLNSGW ILTTTLVLSV
260 270 280 290 300
MVLLWICCAA VATAVEQYVP PEKLSIYGDL EFMNEQKLSR YPAPSLVVVR
310 320
SQTEEHEEAG PLPTKVNLAH SEI
Length:323
Mass (Da):36,241
Last modified:April 20, 2010 - v1
Checksum:i1528DD1B1A99D07F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC114866 Genomic DNA No translation available.
CH474008 Genomic DNA Translation: EDL90443.1
RefSeqiNP_001132937.1, NM_001139465.2
UniGeneiRn.105907

Genome annotation databases

EnsembliENSRNOT00000013224; ENSRNOP00000013224; ENSRNOG00000009778
GeneIDi100196907
KEGGirno:100196907

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC114866 Genomic DNA No translation available.
CH474008 Genomic DNA Translation: EDL90443.1
RefSeqiNP_001132937.1, NM_001139465.2
UniGeneiRn.105907

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000013224

Proteomic databases

PRIDEiD3ZTP3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000013224; ENSRNOP00000013224; ENSRNOG00000009778
GeneIDi100196907
KEGGirno:100196907

Organism-specific databases

CTDi9528
RGDi1310313 Tmem59

Phylogenomic databases

eggNOGiENOG410IIST Eukaryota
ENOG410XTCW LUCA
GeneTreeiENSGT00390000008279
OMAiQEPTNLK
OrthoDBiEOG091G0EVN
TreeFamiTF331226

Gene expression databases

BgeeiENSRNOG00000009778 Expressed in 10 organ(s), highest expression level in lung

Family and domain databases

InterProiView protein in InterPro
IPR022065 Uncharacterised_TMEM59
PANTHERiPTHR28652 PTHR28652, 1 hit
PfamiView protein in Pfam
PF12280 BSMAP, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZTP3_RAT
AccessioniPrimary (citable) accession number: D3ZTP3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 73 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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