Bcl6b

Functionⁱ

GO - Molecular functionⁱ

DNA binding
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635
DNA-binding transcription repressor activity, RNA polymerase II-specific
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635
RNA polymerase II regulatory region sequence-specific DNA binding
Source: GO_Central
Inferred from biological aspect of ancestorⁱ
- 21873635

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Ligand	Metal-binding, Zinc

Ligand

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: B-cell CLL/lymphoma 6BImported Submitted name: Similar to BAZF (Predicted)Imported
Gene namesⁱ	Name:Bcl6bImported Synonyms:RGD1563179_predictedImported ORF Names:rCG_33355Imported
Organismⁱ	Rattus norvegicus (Rat)Imported
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentⁱ: Chromosome 10

Organism-specific databases

Rat genome database More...RGDⁱ	1563179 Bcl6b

RGDⁱ

1563179 Bcl6b

Subcellular locationⁱ

GO - Cellular component

PTM / Processingⁱ

Proteomic databases

PRIDEⁱ	D3ZTN3

PRIDEⁱ

D3ZTN3

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000059956 Expressed in 9 organ(s), highest expression level in heart

Bgeeⁱ

ENSRNOG00000059956 Expressed in 9 organ(s), highest expression level in heart

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000025430

STRINGⁱ

10116.ENSRNOP00000025430

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Length
Domainⁱ	38 – 105	BTBInterPro annotationAdd BLAST	68
Domainⁱ	321 – 348	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	349 – 376	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	377 – 404	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	405 – 432	C2H2-typeInterPro annotationAdd BLAST	28
Domainⁱ	433 – 461	C2H2-typeInterPro annotationAdd BLAST	29

Keywords - Domainⁱ

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGⁱ	KOG1721 Eukaryota COG5048 LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00930000150977
KEGG Orthology (KO) More...KOⁱ	K22648
OMAⁱ	VCGARFN
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G025U

Family and domain databases

InterProⁱ	View protein in InterPro IPR000210 BTB/POZ_dom IPR011333 SKP1/BTB/POZ_sf IPR036236 Znf_C2H2_sf IPR013087 Znf_C2H2_type
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00651 BTB, 1 hit PF00096 zf-C2H2, 2 hits
SMARTⁱ	View protein in SMART SM00225 BTB, 1 hit SM00355 ZnF_C2H2, 5 hits
SUPFAMⁱ	SSF54695 SSF54695, 1 hit SSF57667 SSF57667, 3 hits
PROSITEⁱ	View protein in PROSITE PS50097 BTB, 1 hit PS00028 ZINC_FINGER_C2H2_1, 5 hits PS50157 ZINC_FINGER_C2H2_2, 5 hits

Sequenceⁱ

Sequence statusⁱ: Complete.

D3ZTN3-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MGSTAAPEGA LGYVREFTRH SSDVLSNLNE LRLRGILTDV TLLVGGQPLR 
        60         70         80         90        100
AHKAVLIACS GFFYSIFRGR AGVGVDVLSL PGGPEARGFA PLLDFMYTSR 
       110        120        130        140        150
LRLSPATAPA VLAAATYLQM EHVVQACHRF IQASYEPLGI SLRPMEAEPP 
       160        170        180        190        200
RPPTVPPPGS PRRSEGHPDP PTESRSCSQG SPSPASPDPK ACNWKKYKFI 
       210        220        230        240        250
VLNSQSSQAG SLAGESSGQP CPQARLPSGD EACSSSSSSS SEEGATPGLQ 
       260        270        280        290        300
SRLSLATTTA RFKCGALANN SYLFTPPAQE TSKQAHPPPG SECLSCQNCE 
       310        320        330        340        350
AVAGCSSGIE PLAPGDEDKP YKCQLCRSAF RYKGNLASHR TVHTGEKPYR 
       360        370        380        390        400
CSVCGARFNR PANLKTHSRI HSGEKPYKCE TCGSRFVQVA HLRAHVLIHT 
       410        420        430        440        450
GEKPYPCPTC GTRFRHLQTL KSHVRIHTGE KPYHCDPCGL HFRHKSQLRL 
       460        470 
HLRQKHGAAT NTKVRYHILG GP

Length:472

Mass (Da):50,945

Last modified:April 20, 2010 - v1

Checksum:ⁱE6397297AB6876DF

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07029870 Genomic DNA No translation available. AABR07072136 Genomic DNA No translation available. CH473948 Genomic DNA Translation: EDM04985.1
NCBI Reference Sequences More...RefSeqⁱ	NP_001101749.1, NM_001108279.1 XP_008766063.1, XM_008767841.1 XP_008766064.1, XM_008767842.1 XP_008766065.1, XM_008767843.1
UniGeneⁱ	Rn.137148

Genome annotation databases

Ensemblⁱ	ENSRNOT00000090338; ENSRNOP00000071137; ENSRNOG00000059956
GeneIDⁱ	360551
KEGGⁱ	rno:360551
UCSC genome browser More...UCSCⁱ	RGD:1563179 rat

Protein	Similar proteins		Species	Score	Length	Source
D3ZTN3	B-cell CLL/lymphoma 6 member B protein isoform X2		BALAS		476	UniRef90_D3ZTN3
B-cell CLL/lymphoma 6 member B protein (Fragment)		ESCRO		579
Uncharacterized protein		CAVPO		475
B-cell CLL/lymphoma 6 member B protein		MESAU		472
B-cell CLL/lymphoma 6 member B protein		Florida manatee		472
+3

Protein	Similar proteins		Species	Score	Length	Source
D3ZTN3	B-cell CLL/lymphoma 6 member B protein isoform X2		BALAS		476	UniRef50_D3ZTN3
B-cell CLL/lymphoma 6 member B protein (Fragment)		ESCRO		579
Uncharacterized protein		CAVPO		475
B-cell CLL/lymphoma 6 member B protein		Florida manatee		472
B-cell CLL/lymphoma 6 member B protein		MESAU		472
+5

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07029870 Genomic DNA No translation available. AABR07072136 Genomic DNA No translation available. CH473948 Genomic DNA Translation: EDM04985.1
RefSeqⁱ	NP_001101749.1, NM_001108279.1 XP_008766063.1, XM_008767841.1 XP_008766064.1, XM_008767842.1 XP_008766065.1, XM_008767843.1
UniGeneⁱ	Rn.137148

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000025430

STRINGⁱ

10116.ENSRNOP00000025430

Proteomic databases

PRIDEⁱ	D3ZTN3

PRIDEⁱ

D3ZTN3

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000090338; ENSRNOP00000071137; ENSRNOG00000059956
GeneIDⁱ	360551
KEGGⁱ	rno:360551
UCSCⁱ	RGD:1563179 rat

Organism-specific databases

CTDⁱ	255877
RGDⁱ	1563179 Bcl6b

Phylogenomic databases

eggNOGⁱ	KOG1721 Eukaryota COG5048 LUCA
GeneTreeⁱ	ENSGT00930000150977
KOⁱ	K22648
OMAⁱ	VCGARFN
OrthoDBⁱ	EOG091G025U

Gene expression databases

Bgeeⁱ	ENSRNOG00000059956 Expressed in 9 organ(s), highest expression level in heart

Bgeeⁱ

ENSRNOG00000059956 Expressed in 9 organ(s), highest expression level in heart

Family and domain databases

InterProⁱ	View protein in InterPro IPR000210 BTB/POZ_dom IPR011333 SKP1/BTB/POZ_sf IPR036236 Znf_C2H2_sf IPR013087 Znf_C2H2_type
Pfamⁱ	View protein in Pfam PF00651 BTB, 1 hit PF00096 zf-C2H2, 2 hits
SMARTⁱ	View protein in SMART SM00225 BTB, 1 hit SM00355 ZnF_C2H2, 5 hits
SUPFAMⁱ	SSF54695 SSF54695, 1 hit SSF57667 SSF57667, 3 hits
PROSITEⁱ	View protein in PROSITE PS50097 BTB, 1 hit PS00028 ZINC_FINGER_C2H2_1, 5 hits PS50157 ZINC_FINGER_C2H2_2, 5 hits
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	D3ZTN3_RAT
Accessionⁱ	D3ZTN3Primary (citable) accession number: D3ZTN3
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	April 20, 2010
	Last sequence update:	April 20, 2010
	Last modified:	November 7, 2018
	This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - D3ZTN3 (D3ZTN3_RAT)

Your basket is currently empty. i <p>When browsing through different UniProt proteins, you can use the ‘basket’ to save them, so that you can back to find or analyse them later.<p><a href='/help/basket' target='_top'>More...</a></p>

B-cell CLL/lymphoma 6B

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Nucleus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Keywords - Domaini

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

UniProt is an ELIXIR core data resource

Your basket is currently empty. ⁱ

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

Subcellular locationⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

Family & Domainsⁱ

Keywords - Domainⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ