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Protein
Submitted name:

Achaete-scute family bHLH transcription factor 4

Gene

Ascl4

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Achaete-scute family bHLH transcription factor 4Imported
Gene namesi
Name:Ascl4Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1307533 Ascl4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD3ZS54

Expressioni

Gene expression databases

BgeeiENSRNOG00000031493

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000051020

Structurei

3D structure databases

ProteinModelPortaliD3ZS54
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini59 – 111BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiKOG4029 Eukaryota
ENOG411227D LUCA
GeneTreeiENSGT00530000063321
InParanoidiD3ZS54
KOiK09067
OrthoDBiEOG091G0OGL
PhylomeDBiD3ZS54
TreeFamiTF322889

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR015660 MASH1/Ascl1a-like
PANTHERiPTHR13935 PTHR13935, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZS54-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEKCKSAGLL ALHSPLRASP LGALARREPC RVSARQDTAD CARRRPCPSL
60 70 80 90 100
PPGGVAEPAF LRQRNERERQ RVRCVNEGYA RLRQHLPREL AGQRLSKVET
110 120 130 140
LRAAIGYIKQ LQELLERHRP DLNSDGESKA SSGASPCSSE PEERG
Length:145
Mass (Da):16,090
Last modified:April 20, 2010 - v1
Checksum:i6AA87B6B29555F53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC136584 Genomic DNA No translation available.
RefSeqiXP_006226038.1, XM_006225976.3
XP_006241232.1, XM_006241170.3

Genome annotation databases

EnsembliENSRNOT00000044252; ENSRNOP00000051020; ENSRNOG00000031493
GeneIDi299687
KEGGirno:299687
UCSCiRGD:1307533 rat

Similar proteinsi

Entry informationi

Entry nameiD3ZS54_RAT
AccessioniPrimary (citable) accession number: D3ZS54
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: March 28, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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