Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Atonal bHLH transcription factor 1

Gene

Atoh1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Atonal bHLH transcription factor 1Imported
Submitted name:
RCG55352Imported
Gene namesi
Name:Atoh1Imported
ORF Names:rCG_55352Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1565171 Atoh1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZQL9

Expressioni

Gene expression databases

BgeeiENSRNOG00000006383 Expressed in 2 organ(s), highest expression level in colon

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008358

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini156 – 208BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiKOG4395 Eukaryota
ENOG411269K LUCA
GeneTreeiENSGT00680000099860
KOiK09083
OMAiKQVNGVQ
OrthoDBiEOG091G0R1N
TreeFamiTF315153

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR032661 ATOH1
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PANTHERiPTHR19290:SF82 PTHR19290:SF82, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZQL9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSRLLHAEEW AEVKELGDHH RHPQPHHIPQ LTPQPPATLQ ARDHPVYPAE
60 70 80 90 100
LSLLDSTDPR AWLTPTLQGL CTARAAQYLL HSPELGASEA AAPGDEADGQ
110 120 130 140 150
GELVRRSGCG GLSKSPGPVK VREQLCKLKG GVVVDELGCS RQRAPSSKQV
160 170 180 190 200
NGVQKQRRLA ANARERRRMH GLNHAFDQLR NVIPSFNNDK KLSKYETLQM
210 220 230 240 250
AQIYINALSE LLQTPSVGEQ PPPPAASCKN DHHHLRAAAS YEGGAGASAV
260 270 280 290 300
AGAQPAPGGG PRPTPPGACR TRFSTPASSG GYSVQLDALH FPAFEDRALT
310 320 330 340 350
AMMAQKDLSP SLPGGILQPV PEDSSKTSPR SHRSDGEFSP HSHYSDSDEA

S
Length:351
Mass (Da):37,651
Last modified:April 20, 2010 - v1
Checksum:i071D7DA8B6828E17
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07060810 Genomic DNA No translation available.
CH474042 Genomic DNA Translation: EDL91604.1
RefSeqiNP_001102708.1, NM_001109238.1
UniGeneiRn.218507

Genome annotation databases

EnsembliENSRNOT00000008358; ENSRNOP00000008358; ENSRNOG00000006383
GeneIDi500156
KEGGirno:500156
UCSCiRGD:1565171 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07060810 Genomic DNA No translation available.
CH474042 Genomic DNA Translation: EDL91604.1
RefSeqiNP_001102708.1, NM_001109238.1
UniGeneiRn.218507

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008358

Proteomic databases

PRIDEiD3ZQL9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000008358; ENSRNOP00000008358; ENSRNOG00000006383
GeneIDi500156
KEGGirno:500156
UCSCiRGD:1565171 rat

Organism-specific databases

CTDi474
RGDi1565171 Atoh1

Phylogenomic databases

eggNOGiKOG4395 Eukaryota
ENOG411269K LUCA
GeneTreeiENSGT00680000099860
KOiK09083
OMAiKQVNGVQ
OrthoDBiEOG091G0R1N
TreeFamiTF315153

Gene expression databases

BgeeiENSRNOG00000006383 Expressed in 2 organ(s), highest expression level in colon

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR032661 ATOH1
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PANTHERiPTHR19290:SF82 PTHR19290:SF82, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZQL9_RAT
AccessioniPrimary (citable) accession number: D3ZQL9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again