Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Sp8 transcription factor

Gene

Sp8

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
  • nucleic acid binding Source: InterPro

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Sp8 transcription factorImported
Gene namesi
Name:Sp8Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 6

Organism-specific databases

RGDi1307619 Sp8

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD3ZQL2
PRIDEiD3ZQL2

Expressioni

Gene expression databases

BgeeiENSRNOG00000005943 Expressed in 1 organ(s), highest expression level in brain

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008362

Structurei

3D structure databases

ProteinModelPortaliD3ZQL2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini374 – 403C2H2-typeInterPro annotationAdd BLAST30
Domaini404 – 433C2H2-typeInterPro annotationAdd BLAST30
Domaini434 – 458C2H2-typeInterPro annotationAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
InParanoidiD3ZQL2
KOiK09198
OMAiSYPDTSP
OrthoDBiEOG091G0HX6
TreeFamiTF350150

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits

Sequencei

Sequence statusi: Complete.

D3ZQL2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATSLLGEEP RLGSTPLAML AATCNKIGSP SPSPSSLSDS SSSFSKGFHP
60 70 80 90 100
WKRSSSSSSG SCNVVGSSLS SFGVSGASRN GGSSSAAAAA AAAAAAAAAL
110 120 130 140 150
VSDSFSCGGS PGSSAFSLTS SSAAAAAAAA AAAASSSPFA NDYSVFQAPG
160 170 180 190 200
VSGGSGGGGG GGGGGSGAHS QDSSHQPVFI SKVHTSVDGL QGIYPRVGMA
210 220 230 240 250
HPYESWFKPS HPGLGAAADV GSAGASSWWD VGAGWIDVQN PNGAAALPGS
260 270 280 290 300
LHPAAGGLQT SLHSPLGGYN SDYSGLSHSA FSSGASSHLL SPAGQHLMDG
310 320 330 340 350
FKPVLPGSYP DSAPSPLAGA GSSMLSAGPA APLGGSPRSS ARRYSGRATC
360 370 380 390 400
DCPNCQEAER LGPAGASLRR KGLHSCHIPG CGKVYGKTSH LKAHLRWHTG
410 420 430 440 450
ERPFVCNWLF CGKRFTRSDE LQRHLRTHTG EKRFACPVCN KRFMRSDHLS
460 470 480 490 500
KHVKTHSGGG GSAGSGGGKK GSDTDSEHSA AGSPPCHSPE LLQPPEPGHR

NGLE
Length:504
Mass (Da):50,241
Last modified:April 3, 2013 - v2
Checksum:iFC6D83EAD1EBC919
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07065930 Genomic DNA No translation available.
RefSeqiNP_001178703.1, NM_001191774.1
UniGeneiRn.225046

Genome annotation databases

EnsembliENSRNOT00000008362; ENSRNOP00000008362; ENSRNOG00000005943
GeneIDi299499
KEGGirno:299499

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07065930 Genomic DNA No translation available.
RefSeqiNP_001178703.1, NM_001191774.1
UniGeneiRn.225046

3D structure databases

ProteinModelPortaliD3ZQL2
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000008362

Proteomic databases

PaxDbiD3ZQL2
PRIDEiD3ZQL2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000008362; ENSRNOP00000008362; ENSRNOG00000005943
GeneIDi299499
KEGGirno:299499

Organism-specific databases

CTDi221833
RGDi1307619 Sp8

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00760000118984
InParanoidiD3ZQL2
KOiK09198
OMAiSYPDTSP
OrthoDBiEOG091G0HX6
TreeFamiTF350150

Gene expression databases

BgeeiENSRNOG00000005943 Expressed in 1 organ(s), highest expression level in brain

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 3 hits
SUPFAMiSSF57667 SSF57667, 2 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 3 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZQL2_RAT
AccessioniPrimary (citable) accession number: D3ZQL2
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 3, 2013
Last modified: November 7, 2018
This is version 59 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again