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UniProtKB - D3ZNU4 (D3ZNU4_RAT)
Protein
Submitted name:
RCG60547
Gene
Zfp280b
Organism
Rattus norvegicus (Rat)
Status
Functioni
May function as a transcription factor.
ARBA annotationGO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: GO_Central
- RNA polymerase II cis-regulatory region sequence-specific DNA binding Source: GO_Central
GO - Biological processi
- regulation of transcription, DNA-templated Source: GO_Central
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: RCG60547ImportedSubmitted name: Zinc finger protein 280B-likeImported |
Gene namesi | ORF Names:rCG_60547Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 6501280, LOC100909869 9210655, LOC103690173 1565460, Zfp280b |
Subcellular locationi
Nucleus
- Nucleus ARBA annotation
Nucleus
- nucleus Source: UniProtKB-SubCell
Keywords - Cellular componenti
NucleusARBA annotationExpressioni
Gene expression databases
Bgeei | ENSRNOG00000028441, Expressed in skeletal muscle tissue and 19 other tissues |
Structurei
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 332 – 360 | C2H2-typeInterPro annotationAdd BLAST | 29 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 31 | DisorderedSequence analysisAdd BLAST | 31 | |
Regioni | 62 – 103 | DisorderedSequence analysisAdd BLAST | 42 | |
Regioni | 231 – 255 | DisorderedSequence analysisAdd BLAST | 25 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000161054 |
HOGENOMi | CLU_010097_3_2_1 |
OMAi | STHQCSK |
OrthoDBi | 105829at2759 |
TreeFami | TF331707 |
Family and domain databases
InterProi | View protein in InterPro IPR025243, DUF4195 IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF13836, DUF4195, 1 hit |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 6 hits |
SUPFAMi | SSF57667, SSF57667, 1 hit |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 2 hits PS50157, ZINC_FINGER_C2H2_2, 1 hit |
i Sequence
Sequence statusi: Complete.
D3ZNU4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEQPYVVDDD ESDPEPQPRS QEPIQVLDED DSEDAELIFV GVENVKEDAE
60 70 80 90 100
LIFVGVTSTS QPANSNILNR VTPGSRLKRK HDRLRETTTQ RLQPSPPAAP
110 120 130 140 150
TSEAAIVLPV SPAESRSTDS PIIIEPLSES DYKSNSQVVP SSSSKCCSPL
160 170 180 190 200
ATLSSSESGP ARAACSGGGL NESLYVSKCH FSINPQRPER SIEIVEELSS
210 220 230 240 250
ALPPSGPFHT SNAQQRTPSL EAPKSLNLFV NGAPLSGDPV HPRQDSGSVD
260 270 280 290 300
TDFSSLASPE TFDPKKGSLT LLLSDFYYGQ YKGEGKPEQK THTTFKCPSC
310 320 330 340 350
SKALKNVKFM NHTKHHLELE RQGSDEAWES HTTCLRCHRL FASPFQLECH
360 370 380 390 400
IDRVHTAPDP CVVCKICELS FETEQVLLEH MKDNHKPGEM PYVCQVCKYR
410 420 430 440 450
SSVFADVETH FTKCHVNTKN LLCPFCLKIF RTGMPYMCHC RGHWERNGHQ
460 470 480 490 500
CSKCRLQFLT FKEKMEHKTQ CHQMFRKPKQ LEGLPPETKV VIQVSVKPVE
510 520 530
AESVEVASIT VSTTDWEPSC PRSQGRLSQK PH
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC125672 Genomic DNA No translation available. CH473988 Genomic DNA Translation: EDL97162.1 |
RefSeqi | NP_001099854.1, NM_001106384.1 XP_006256390.1, XM_006256328.3 XP_008771098.1, XM_008772876.2 XP_008772074.1, XM_008773852.2 |
Genome annotation databases
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC125672 Genomic DNA No translation available. CH473988 Genomic DNA Translation: EDL97162.1 |
RefSeqi | NP_001099854.1, NM_001106384.1 XP_006256390.1, XM_006256328.3 XP_008771098.1, XM_008772876.2 XP_008772074.1, XM_008773852.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000034023 |
Genome annotation databases
Organism-specific databases
CTDi | 64453 |
RGDi | 6501280, LOC100909869 9210655, LOC103690173 1565460, Zfp280b |
Phylogenomic databases
eggNOGi | KOG1721, Eukaryota |
GeneTreei | ENSGT00940000161054 |
HOGENOMi | CLU_010097_3_2_1 |
OMAi | STHQCSK |
OrthoDBi | 105829at2759 |
TreeFami | TF331707 |
Gene expression databases
Bgeei | ENSRNOG00000028441, Expressed in skeletal muscle tissue and 19 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR025243, DUF4195 IPR036236, Znf_C2H2_sf IPR013087, Znf_C2H2_type |
Pfami | View protein in Pfam PF13836, DUF4195, 1 hit |
SMARTi | View protein in SMART SM00355, ZnF_C2H2, 6 hits |
SUPFAMi | SSF57667, SSF57667, 1 hit |
PROSITEi | View protein in PROSITE PS00028, ZINC_FINGER_C2H2_1, 2 hits PS50157, ZINC_FINGER_C2H2_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | D3ZNU4_RAT | |
Accessioni | D3ZNU4Primary (citable) accession number: D3ZNU4 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 20, 2010 |
Last sequence update: | April 20, 2010 | |
Last modified: | January 19, 2022 | |
This is version 94 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |