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Protein
Submitted name:

Germinal center-associated,-signaling and motility

Gene

Gcsam

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Germinal center-associated,-signaling and motilityImported
Gene namesi
Name:GcsamImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 11

Organism-specific databases

RGDi1591321 Gcsam

PTM / Processingi

Proteomic databases

PaxDbiD3ZLK1
PRIDEiD3ZLK1

Expressioni

Gene expression databases

BgeeiENSRNOG00000022110 Expressed in 8 organ(s), highest expression level in spleen
ExpressionAtlasiD3ZLK1 baseline

Interactioni

GO - Molecular functioni

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410JBYS Eukaryota
ENOG41115IK LUCA
GeneTreeiENSGT00730000111441
InParanoidiD3ZLK1
OMAiTSRCWDC
OrthoDBiEOG091G0O8J
PhylomeDBiD3ZLK1
TreeFamiTF338596

Family and domain databases

InterProiView protein in InterPro
IPR031364 GC_assoc_lym
PANTHERiPTHR35351 PTHR35351, 1 hit
PfamiView protein in Pfam
PF15666 HGAL, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZLK1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGNCLQRTTR WQLDMQETPW NLRLQNAKGR PCRYFKGWSC CHIVEGCSCL
60 70 80 90 100
PWKNISTFKA RQESPKQNEG MTSAPIQDNA NETYTEELCY ILVDHKALRG
110 120 130 140 150
RPSGKPAEGL YENISNKVDR HRESSRGTET EYSVLRFSST SQPLPSTEDE
160 170 180
YELLVPSRFS SYANQQPQPL TAPFETHFSH LQ
Length:182
Mass (Da):20,950
Last modified:April 20, 2010 - v1
Checksum:iE4C58337180CDD86
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1W2Q6E0A0A1W2Q6E0_RAT
Germinal center-associated,-signali...
Gcsam rCG_52881
159Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC108574 Genomic DNA No translation available.
RefSeqiXP_001064866.2, XM_001064866.5
XP_003752560.1, XM_003752512.4

Genome annotation databases

EnsembliENSRNOT00000043020; ENSRNOP00000041206; ENSRNOG00000022110
GeneIDi685692
KEGGirno:685692

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC108574 Genomic DNA No translation available.
RefSeqiXP_001064866.2, XM_001064866.5
XP_003752560.1, XM_003752512.4

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiD3ZLK1
PRIDEiD3ZLK1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000043020; ENSRNOP00000041206; ENSRNOG00000022110
GeneIDi685692
KEGGirno:685692

Organism-specific databases

CTDi257144
RGDi1591321 Gcsam

Phylogenomic databases

eggNOGiENOG410JBYS Eukaryota
ENOG41115IK LUCA
GeneTreeiENSGT00730000111441
InParanoidiD3ZLK1
OMAiTSRCWDC
OrthoDBiEOG091G0O8J
PhylomeDBiD3ZLK1
TreeFamiTF338596

Gene expression databases

BgeeiENSRNOG00000022110 Expressed in 8 organ(s), highest expression level in spleen
ExpressionAtlasiD3ZLK1 baseline

Family and domain databases

InterProiView protein in InterPro
IPR031364 GC_assoc_lym
PANTHERiPTHR35351 PTHR35351, 1 hit
PfamiView protein in Pfam
PF15666 HGAL, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZLK1_RAT
AccessioniPrimary (citable) accession number: D3ZLK1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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