Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Rabenosyn, RAB effector

Gene

Rbsn

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri156 – 259FYVE-typePROSITE-ProRule annotationAdd BLAST104

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-RNO-168138 Toll Like Receptor 9 (TLR9) Cascade
R-RNO-983231 Factors involved in megakaryocyte development and platelet production

Names & Taxonomyi

Protein namesi
Submitted name:
Rabenosyn, RAB effectorImported
Submitted name:
Zinc finger, FYVE domain containing 20 (Predicted)Imported
Gene namesi
Name:RbsnImported
Synonyms:Zfyve20Imported, Zfyve20_predictedImported
ORF Names:rCG_56203Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 4

Organism-specific databases

RGDi1305397 Rbsn

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZL11

Expressioni

Gene expression databases

BgeeiENSRNOG00000011391 Expressed in 10 organ(s), highest expression level in brain

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015602

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 42C2H2-typeInterPro annotationAdd BLAST29
Domaini156 – 259FYVE-typeInterPro annotationAdd BLAST104

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili314 – 334Sequence analysisAdd BLAST21
Coiled coili381 – 401Sequence analysisAdd BLAST21
Coiled coili474 – 531Sequence analysisAdd BLAST58
Coiled coili761 – 781Sequence analysisAdd BLAST21

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri156 – 259FYVE-typePROSITE-ProRule annotationAdd BLAST104

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1842 Eukaryota
ENOG410XP0U LUCA
GeneTreeiENSGT00390000007159
KOiK12481
OMAiYSLEHAN
OrthoDBiEOG091G06L4
TreeFamiTF106125

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR036531 Rbsn_Rab-bd_sf
IPR021565 Rbsn_Rab_binding_dom
IPR013087 Znf_C2H2_type
IPR000306 Znf_FYVE
IPR017455 Znf_FYVE-rel
IPR011011 Znf_FYVE_PHD
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF01363 FYVE, 1 hit
PF11464 Rbsn, 2 hits
SMARTiView protein in SMART
SM00064 FYVE, 1 hit
SUPFAMiSSF140125 SSF140125, 2 hits
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50178 ZF_FYVE, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZL11-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASLDDAGEV REGFLCPLCL KDLQSFYQLQ SHYEEEHSGD RDVKGQIKNL
60 70 80 90 100
VQKARKAKNK LLKREGDDRV EPGTQGYESF SYGGVDPYMW EPQELGAMRS
110 120 130 140 150
HLSDFKKHRA ARIDHYVIEV NKLIIRLEKL TAFDRTNTET SKIRAIEKSV
160 170 180 190 200
VPWVNDQDVP FCPDCGNKFS IRNRRHHCRL CGSIMCKKCM ELIGLPLANK
210 220 230 240 250
LTSASKDSLS THTSPSQSPN SVHGSRRGSI SSMSSVSSVL DEKDDERIRC
260 270 280 290 300
CTHCKDTLLK REQQMDEKEH TPDIVKLYEK LRLCMEKVDQ KAPEYIRMAA
310 320 330 340 350
SLNAGETTYS LEHANDLRVE VQKVYELIDA LSKKILTLGL NQDPSPHPNT
360 370 380 390 400
LRLQRMIRYS ATLFVQEKLL GLMSLPTKEQ FEELKKKRKQ DLEQKRTMER
410 420 430 440 450
QAALESRRKL EERQSGLASH TANGDMRSLQ GIPAPLRKAE GWLPLSEGQV
460 470 480 490 500
QSEDPDPLLQ QIYNITSFIR QAKAAGRTDE VRTLQENLRQ LQDEYDQQQT
510 520 530 540 550
EKAIELSRRQ AEEEELQREQ LQMLRQRELE REEEQFLAAS LQTRTRVLEL
560 570 580 590 600
REVLPFQLEP IRGPHTDLAY SLDEDSSPVQ SSTAPDILSP GSALAPIHVW
610 620 630 640 650
SGSPALSQEL LLQSTISQPS SKTSLNPFDE EDLSSPIEGA VSPAAVEAFL
660 670 680 690 700
GPPAAVTKEY NPFEEDAEEE EVAELGAGNP FTDPDSPAPN PFDEDDHPRS
710 720 730 740 750
ASPAAPGNPF EECPCTNPFE VDSDSGMEAE EHIEEELLLQ QIDNIKAYIF
760 770 780
DAKQCGRMDE VEVLTENLRE LKCTLAKQKG APN
Length:783
Mass (Da):88,477
Last modified:April 20, 2010 - v1
Checksum:i3387C2EF72EB5476
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC110333 Genomic DNA No translation available.
CH473957 Genomic DNA Translation: EDL91391.1
RefSeqiNP_001101345.1, NM_001107875.1
XP_017448125.1, XM_017592636.1
UniGeneiRn.172475

Genome annotation databases

EnsembliENSRNOT00000015602; ENSRNOP00000015602; ENSRNOG00000011391
GeneIDi312562
KEGGirno:312562
UCSCiRGD:1305397 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC110333 Genomic DNA No translation available.
CH473957 Genomic DNA Translation: EDL91391.1
RefSeqiNP_001101345.1, NM_001107875.1
XP_017448125.1, XM_017592636.1
UniGeneiRn.172475

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000015602

Proteomic databases

PRIDEiD3ZL11

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000015602; ENSRNOP00000015602; ENSRNOG00000011391
GeneIDi312562
KEGGirno:312562
UCSCiRGD:1305397 rat

Organism-specific databases

CTDi64145
RGDi1305397 Rbsn

Phylogenomic databases

eggNOGiKOG1842 Eukaryota
ENOG410XP0U LUCA
GeneTreeiENSGT00390000007159
KOiK12481
OMAiYSLEHAN
OrthoDBiEOG091G06L4
TreeFamiTF106125

Enzyme and pathway databases

ReactomeiR-RNO-168138 Toll Like Receptor 9 (TLR9) Cascade
R-RNO-983231 Factors involved in megakaryocyte development and platelet production

Gene expression databases

BgeeiENSRNOG00000011391 Expressed in 10 organ(s), highest expression level in brain

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR036531 Rbsn_Rab-bd_sf
IPR021565 Rbsn_Rab_binding_dom
IPR013087 Znf_C2H2_type
IPR000306 Znf_FYVE
IPR017455 Znf_FYVE-rel
IPR011011 Znf_FYVE_PHD
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF01363 FYVE, 1 hit
PF11464 Rbsn, 2 hits
SMARTiView protein in SMART
SM00064 FYVE, 1 hit
SUPFAMiSSF140125 SSF140125, 2 hits
SSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS50178 ZF_FYVE, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZL11_RAT
AccessioniPrimary (citable) accession number: D3ZL11
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 80 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again