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Protein
Submitted name:

RGD1559613 (Predicted)

Gene

Smim17

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
RGD1559613 (Predicted)Imported
Submitted name:
Small integral membrane protein 17Imported
Gene namesi
Name:Smim17Imported
Synonyms:RGD1559613Imported, RGD1559613_predictedImported
ORF Names:rCG_32053Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi1559613 Smim17

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei87 – 107HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PRIDEiD3ZKL1

Expressioni

Gene expression databases

BgeeiENSRNOG00000042502 Expressed in 7 organ(s), highest expression level in brain

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060864

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IZYU Eukaryota
ENOG4111814 LUCA
GeneTreeiENSGT00490000044430
OMAiWESRAWE
OrthoDBiEOG091G13P3

Sequencei

Sequence statusi: Complete.

D3ZKL1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQSLRTEQTQ GLLPRDSKAW EKPCHSTFPK DWEAVEVGAS SCDSDEKDLS
60 70 80 90 100
SQETGLSQEW SSVEEDEESE DSQGFVEWSK APQQTTIVLV VCVLFLFLVL

TGMPMMLHI
Length:109
Mass (Da):12,268
Last modified:April 20, 2010 - v1
Checksum:i869A18AF4FED05BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002334 Genomic DNA No translation available.
AABR07002335 Genomic DNA No translation available.
CH474102 Genomic DNA Translation: EDL83181.1
RefSeqiNP_001102608.1, NM_001109138.1
XP_006228256.1, XM_006228194.3
XP_017445039.1, XM_017589550.1
XP_017445040.1, XM_017589551.1
XP_017445041.1, XM_017589552.1
UniGeneiRn.225170

Genome annotation databases

EnsembliENSRNOT00000064949; ENSRNOP00000060864; ENSRNOG00000042502
GeneIDi499067
KEGGirno:499067
UCSCiRGD:1559613 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07002334 Genomic DNA No translation available.
AABR07002335 Genomic DNA No translation available.
CH474102 Genomic DNA Translation: EDL83181.1
RefSeqiNP_001102608.1, NM_001109138.1
XP_006228256.1, XM_006228194.3
XP_017445039.1, XM_017589550.1
XP_017445040.1, XM_017589551.1
XP_017445041.1, XM_017589552.1
UniGeneiRn.225170

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000060864

Proteomic databases

PRIDEiD3ZKL1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000064949; ENSRNOP00000060864; ENSRNOG00000042502
GeneIDi499067
KEGGirno:499067
UCSCiRGD:1559613 rat

Organism-specific databases

CTDi147670
RGDi1559613 Smim17

Phylogenomic databases

eggNOGiENOG410IZYU Eukaryota
ENOG4111814 LUCA
GeneTreeiENSGT00490000044430
OMAiWESRAWE
OrthoDBiEOG091G13P3

Gene expression databases

BgeeiENSRNOG00000042502 Expressed in 7 organ(s), highest expression level in brain

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiD3ZKL1_RAT
AccessioniPrimary (citable) accession number: D3ZKL1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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