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Protein

Clustered mitochondria protein homolog

Gene

Cluh

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Clustered mitochondria protein homologUniRule annotation
Gene namesi
Name:CluhImported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi1307222 Cluh

Subcellular locationi

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

PTM / Processingi

Proteomic databases

PeptideAtlasiD3ZKG9
PRIDEiD3ZKG9

PTM databases

PhosphoSitePlusiD3ZKG9

Expressioni

Gene expression databases

BgeeiENSRNOG00000002669 Expressed in 10 organ(s), highest expression level in heart
ExpressionAtlasiD3ZKG9 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini373 – 615CluInterPro annotationAdd BLAST243

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1183 – 1203Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the CLU family.UniRule annotationSAAS annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1839 Eukaryota
ENOG410XQUQ LUCA
GeneTreeiENSGT00390000012485
InParanoidiD3ZKG9
OrthoDBiEOG091G00TP
TreeFamiTF300565

Family and domain databases

CDDicd15466 CLU-central, 1 hit
Gene3Di1.25.40.10, 1 hit
HAMAPiMF_03013 CLU, 1 hit
InterProiView protein in InterPro
IPR027523 CLU
IPR033646 CLU-central
IPR025697 CLU_dom
IPR028275 CLU_N
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF13236 CLU, 1 hit
PF15044 CLU_N, 1 hit
PF12807 eIF3_p135, 1 hit
SUPFAMiSSF48452 SSF48452, 2 hits
PROSITEiView protein in PROSITE
PS51823 CLU, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZKG9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVIKTDELPA AAPADSAREH GSQAGGKGRP NAADPPSVML LNGDCSENLK
60 70 80 90 100
KEEGSSEPPR ENGLDEGEPG EETTGQEVIV IQDTGFSVKI LAPGIEPFSL
110 120 130 140 150
QVSPQEMVQE IHQVLMDRED TCHRTCFSLH LDGNMLDHFS ELRSVEGLQE
160 170 180 190 200
GSVLRVVEEP YTVREARIHV RHVRDLLKSL DPSDAFNGVD CNSLSFLSVF
210 220 230 240 250
TDGDLGDSGK RKKGLEMDPI DCTPPEYILP GSRERPLCPL QPQNRDWKPL
260 270 280 290 300
QCLKVLTMSG WNPPPGNRKM HGDLMYLFVI TAEDRQVSVT ASTRGFYLNQ
310 320 330 340 350
STAYHFNPKP ASPRFLSHSL VELLNQISPT FKKNFAVLQK KRVQRHPFER
360 370 380 390 400
IATPFQVYSW TAPQAEHAMD CVRAEDAYTS RLGYEEHIPG QTRDWNEELQ
410 420 430 440 450
TTRELPRKNL PERLLRERAI FKVHSDFTAA ATRGAMAVID GNVMAINPSE
460 470 480 490 500
ETKMQMFIWN NIFFSLGFDV RDHYKDFGGD VAAYVAPTND LNGVRTYNAV
510 520 530 540 550
DVEGLYTLGT VVVDYRGYRV TAQSIIPGIL ERDQEQSVIY GSIDFGKTVV
560 570 580 590 600
SHPRYLELLE RTSRPLKILR HRVLNDRDEE VELCSSVECK GIIGNDGRHY
610 620 630 640 650
ILDLLRTFPP DLNFLPVPGE ELPEECSRAG FPRTHRHKLC CLRQELVDAF
660 670 680 690 700
VEHRYLLFMK LAALQLMQQK ASKVDTSTSL ENGGPPSSTE TKSEDSLGSE
710 720 730 740 750
AGCEEEGSSV SGLAKVKELA ETIASDDGTV DPRSREVIQN ACKAVGSVSS
760 770 780 790 800
TAFDIRFNPD IFSPGVRFPE SCQDEVRDQK QLLKDAAAFL LSCQIPGLKI
810 820 830 840 850
GIGELITRSA KHIFKTYLQG VELSGLSAAI SHFLNCFLSS YPNPVAHLPA
860 870 880 890 900
DELLSKKRNK RRKNRPPGAA DNTAWAVMTP QELWKNICQE AKNYFDFTLE
910 920 930 940 950
CDSVDQAVET YGLQKITLLR EISLKTGMQI LLKEYSFDSR HKPAFTEEDV
960 970 980 990 1000
LNIFPVVKHV NPKASDAFHF FQSGQAKVQQ GFLKEGCELI NEALNLFNNV
1010 1020 1030 1040 1050
YGAMHVEICA CLRLLARLHY IMGDYAEALS NQQKAVLMSE RVVGIEHPNT
1060 1070 1080 1090 1100
IQEYMHLALY CFASSQLSTA LSLLYRARYL MLLVFGEDHP EMALLDNNIG
1110 1120 1130 1140 1150
LVLHGVMEYD LSLRFLENAL AVTTKYHGPK ALKVALSHHL VARVYESKAE
1160 1170 1180 1190 1200
FRSALQHEKE GYTIYKTQLG EDHEKTRESS EYLKCLTQQA VALQRTMNEI
1210 1220 1230 1240 1250
YRNGSSANIP PLKFTAPSMA SVLEQLNVIN GILFIPLSQK DLENLKAEVA
1260 1270 1280 1290
RRHQLQEASR NRDKAEEPMA TEPEPDRALE GMGSPQTAKE GPSLSLQG
Length:1,298
Mass (Da):145,348
Last modified:February 17, 2016 - v3
Checksum:iC76AA611B47511B2
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0U1RRV5A0A0U1RRV5_RAT
Clustered mitochondria protein homo...
Cluh
1,349Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07029958 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000003687; ENSRNOP00000003687; ENSRNOG00000002669

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07029958 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

PTM databases

PhosphoSitePlusiD3ZKG9

Proteomic databases

PeptideAtlasiD3ZKG9
PRIDEiD3ZKG9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000003687; ENSRNOP00000003687; ENSRNOG00000002669

Organism-specific databases

RGDi1307222 Cluh

Phylogenomic databases

eggNOGiKOG1839 Eukaryota
ENOG410XQUQ LUCA
GeneTreeiENSGT00390000012485
InParanoidiD3ZKG9
OrthoDBiEOG091G00TP
TreeFamiTF300565

Gene expression databases

BgeeiENSRNOG00000002669 Expressed in 10 organ(s), highest expression level in heart
ExpressionAtlasiD3ZKG9 baseline and differential

Family and domain databases

CDDicd15466 CLU-central, 1 hit
Gene3Di1.25.40.10, 1 hit
HAMAPiMF_03013 CLU, 1 hit
InterProiView protein in InterPro
IPR027523 CLU
IPR033646 CLU-central
IPR025697 CLU_dom
IPR028275 CLU_N
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF13236 CLU, 1 hit
PF15044 CLU_N, 1 hit
PF12807 eIF3_p135, 1 hit
SUPFAMiSSF48452 SSF48452, 2 hits
PROSITEiView protein in PROSITE
PS51823 CLU, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZKG9_RAT
AccessioniPrimary (citable) accession number: D3ZKG9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: February 17, 2016
Last modified: September 12, 2018
This is version 74 of the entry and version 3 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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