Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

GLIS family zinc finger 2

Gene

Glis2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
GLIS family zinc finger 2Imported
Submitted name:
GLIS family zinc finger 2 (Predicted), isoform CRA_aImported
Gene namesi
Name:Glis2Imported
Synonyms:Glis2_predictedImported
ORF Names:rCG_49824Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 10

Organism-specific databases

RGDi1309177 Glis2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZIA9

Expressioni

Gene expression databases

BgeeiENSRNOG00000004766 Expressed in 10 organ(s), highest expression level in adult mammalian kidney

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006680

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini202 – 234C2H2-typeInterPro annotationAdd BLAST33
Domaini235 – 262C2H2-typeInterPro annotationAdd BLAST28
Domaini263 – 292C2H2-typeInterPro annotationAdd BLAST30
Domaini293 – 317C2H2-typeInterPro annotationAdd BLAST25

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
KOiK09233
OMAiDKCLSPE
OrthoDBiEOG091G0IZP
TreeFamiTF351425

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits

Sequencei

Sequence statusi: Complete.

D3ZIA9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MHSLDEPLDL KLSITKLRAA REKRERTLGV PRHHALHREL GLVDDSPTPG
60 70 80 90 100
SPGSPPPGFL LNPKFPEKLD GRFSAAPLVD LSLSPPSGLD SPNGSSSLSP
110 120 130 140 150
ERQGNGDLPP LPTAVDFQPL RYLDGVPSSF QFFLPLGSGG ALHLPASSFL
160 170 180 190 200
TPPKDKCLSP ELPLAKQLVC RWAKCNQLFE LLQDLVDHVN DHHVKPEQDA
210 220 230 240 250
RYCCHWEGCA RHGRGFNARY KMLIHIRTHT NEKPHRCPTC NKSFSRLENL
260 270 280 290 300
KIHNRSHTGE KPYVCPYEGC NKRYSNSSDR FKHTRTHYVD KPYYCKMPGC
310 320 330 340 350
HKRYTDPSSL RKHIKAHGHF VSHEQQELLQ LRPPPKPPLP TPDSGSYVSG
360 370 380 390 400
AQIIIPNPAA LFGGPSLPGL PLPLAPGPLD LSALACGNGG GGGGGMGPGL
410 420 430 440 450
PGSVLPLNLA KNPLLPSPFG AGGLGLPVVS LLGGSAGSKA EGEKGRGSVP
460 470 480 490 500
ARVLGLEDHK TSLERTERSR SRPSPDGLPL LPGTVLDLST GNSAASSPEA
510 520
LTPGWVVIPP GSVLLKPAVV N
Length:521
Mass (Da):55,895
Last modified:April 20, 2010 - v1
Checksum:i36693D47C529E8C6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07029167 Genomic DNA No translation available.
CH474017 Genomic DNA Translation: EDL96297.1
CH474017 Genomic DNA Translation: EDL96298.1
RefSeqiNP_001100448.1, NM_001106978.1
XP_017452708.1, XM_017597219.1
UniGeneiRn.166996

Genome annotation databases

EnsembliENSRNOT00000006680; ENSRNOP00000006680; ENSRNOG00000004766
GeneIDi302946
KEGGirno:302946
UCSCiRGD:1309177 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07029167 Genomic DNA No translation available.
CH474017 Genomic DNA Translation: EDL96297.1
CH474017 Genomic DNA Translation: EDL96298.1
RefSeqiNP_001100448.1, NM_001106978.1
XP_017452708.1, XM_017597219.1
UniGeneiRn.166996

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000006680

Proteomic databases

PRIDEiD3ZIA9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000006680; ENSRNOP00000006680; ENSRNOG00000004766
GeneIDi302946
KEGGirno:302946
UCSCiRGD:1309177 rat

Organism-specific databases

CTDi84662
RGDi1309177 Glis2

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00900000140802
KOiK09233
OMAiDKCLSPE
OrthoDBiEOG091G0IZP
TreeFamiTF351425

Gene expression databases

BgeeiENSRNOG00000004766 Expressed in 10 organ(s), highest expression level in adult mammalian kidney

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00096 zf-C2H2, 2 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 5 hits
SUPFAMiSSF57667 SSF57667, 3 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 3 hits
PS50157 ZINC_FINGER_C2H2_2, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZIA9_RAT
AccessioniPrimary (citable) accession number: D3ZIA9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 10, 2018
This is version 72 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again