Atoh7

Functionⁱ

GO - Molecular functionⁱ

protein dimerization activity Source: InterPro

View the complete GO annotation on QuickGO ...

GO - Biological processⁱ

circadian rhythm Source: Ensembl
entrainment of circadian clock Source: Ensembl
neural retina development Source: Ensembl
optic nerve development Source: Ensembl
regulation of transcription, DNA-templated Source: InterPro

View the complete GO annotation on QuickGO ...

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: Atonal bHLH transcription factor 7Imported
Gene namesⁱ	Name:Atoh7Imported
Organismⁱ	Rattus norvegicus (Rat)Imported
Taxonomic identifierⁱ	10116 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Dipnotetrapodomorpha › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Boreoeutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus
Proteomesⁱ	UP000002494 Componentⁱ: Chromosome 20

Organism-specific databases

Rat genome database More...RGDⁱ	1304957 Atoh7

RGDⁱ

1304957 Atoh7

PTM / Processingⁱ

Proteomic databases

PaxDbⁱ	D3ZG53
PRIDEⁱ	D3ZG53

Expressionⁱ

Gene expression databases

Bgeeⁱ	ENSRNOG00000000384 Expressed in 4 organ(s), highest expression level in brain

Bgeeⁱ

ENSRNOG00000000384 Expressed in 4 organ(s), highest expression level in brain

Interactionⁱ

GO - Molecular functionⁱ

protein dimerization activity Source: InterPro

View the complete GO annotation on QuickGO ...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000000432

STRINGⁱ

10116.ENSRNOP00000000432

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	41 – 93	BHLHInterPro annotationAdd BLAST		53

Phylogenomic databases

eggNOGⁱ	KOG4395 Eukaryota ENOG411269K LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00680000099860
InParanoidⁱ	D3ZG53
KEGG Orthology (KO) More...KOⁱ	K09083
OMAⁱ	HYLPFAG
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G0R1N
PhylomeDBⁱ	D3ZG53
TreeFamⁱ	TF315153

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd00083 HLH, 1 hit
Gene3Dⁱ	4.10.280.10, 1 hit
InterProⁱ	View protein in InterPro IPR032663 Atoh7 IPR011598 bHLH_dom IPR036638 HLH_DNA-bd_sf
PANTHERⁱ	PTHR19290:SF99 PTHR19290:SF99, 1 hit
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF00010 HLH, 1 hit
SMARTⁱ	View protein in SMART SM00353 HLH, 1 hit
SUPFAMⁱ	SSF47459 SSF47459, 1 hit
PROSITEⁱ	View protein in PROSITE PS50888 BHLH, 1 hit

Sequenceⁱ

Sequence statusⁱ: Complete.

D3ZG53-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MKSACKPHGP PAGARGAPPC AGAAERAVSC AGPGRLESAA RRRLAANARE 
        60         70         80         90        100
RRRMQGLNTA FDRLRRVVPQ WGQDKKLSKY ETLQMALSYI VALTRILAEA 
       110        120        130        140 
ERDWVGLRCE QRGRNHPYLP FPGARLQVDP EPYGQKFFGF QPESFPMAS

Length:149

Mass (Da):16,550

Last modified:April 20, 2010 - v1

Checksum:ⁱDF78B34078F50F3A

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07044933 Genomic DNA No translation available.
NCBI Reference Sequences More...RefSeqⁱ	NP_001163953.1, NM_001170482.1
UniGeneⁱ	Rn.222427

Genome annotation databases

Ensemblⁱ	ENSRNOT00000000432; ENSRNOP00000000432; ENSRNOG00000000384
GeneIDⁱ	365564
KEGGⁱ	rno:365564
UCSC genome browser More...UCSCⁱ	RGD:1304957 rat

Protein	Similar proteins		Species	Score	Length	Source
D3ZG53	Protein atonal homolog 7		MOUSE		149	UniRef90_Q9Z2E5
Uncharacterized protein		CRIGR		96
protein atonal homolog 7		MESAU		150
UPI000A311B69		MUSPA		149
UPI000A317868		MUSCR		149
+4

Protein	Similar proteins		Species	Score	Length	Source
D3ZG53	Protein atonal homolog 7		HUMAN		152	UniRef50_Q8N100
Protein atonal homolog 7		MOUSE		149
ATOH7 isoform 1		PANTR		152
Atonal bHLH transcription factor 7		GORGO		152
Uncharacterized protein		PIG		155
+96

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	AABR07044933 Genomic DNA No translation available.
RefSeqⁱ	NP_001163953.1, NM_001170482.1
UniGeneⁱ	Rn.222427

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	10116.ENSRNOP00000000432

STRINGⁱ

10116.ENSRNOP00000000432

Proteomic databases

PaxDbⁱ	D3ZG53
PRIDEⁱ	D3ZG53

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

Ensemblⁱ	ENSRNOT00000000432; ENSRNOP00000000432; ENSRNOG00000000384
GeneIDⁱ	365564
KEGGⁱ	rno:365564
UCSCⁱ	RGD:1304957 rat

Organism-specific databases

CTDⁱ	220202
RGDⁱ	1304957 Atoh7

Phylogenomic databases

eggNOGⁱ	KOG4395 Eukaryota ENOG411269K LUCA
GeneTreeⁱ	ENSGT00680000099860
InParanoidⁱ	D3ZG53
KOⁱ	K09083
OMAⁱ	HYLPFAG
OrthoDBⁱ	EOG091G0R1N
PhylomeDBⁱ	D3ZG53
TreeFamⁱ	TF315153

Gene expression databases

Bgeeⁱ	ENSRNOG00000000384 Expressed in 4 organ(s), highest expression level in brain

Bgeeⁱ

ENSRNOG00000000384 Expressed in 4 organ(s), highest expression level in brain

Family and domain databases

CDDⁱ	cd00083 HLH, 1 hit
Gene3Dⁱ	4.10.280.10, 1 hit
InterProⁱ	View protein in InterPro IPR032663 Atoh7 IPR011598 bHLH_dom IPR036638 HLH_DNA-bd_sf
PANTHERⁱ	PTHR19290:SF99 PTHR19290:SF99, 1 hit
Pfamⁱ	View protein in Pfam PF00010 HLH, 1 hit
SMARTⁱ	View protein in SMART SM00353 HLH, 1 hit
SUPFAMⁱ	SSF47459 SSF47459, 1 hit
PROSITEⁱ	View protein in PROSITE PS50888 BHLH, 1 hit
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	D3ZG53_RAT
Accessionⁱ	D3ZG53Primary (citable) accession number: D3ZG53
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	April 20, 2010
	Last sequence update:	April 20, 2010
	Last modified:	November 7, 2018
	This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - D3ZG53 (D3ZG53_RAT)

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Atonal bHLH transcription factor 7

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Organism-specific databases

PTM / Processingⁱ

Proteomic databases

Expressionⁱ

Gene expression databases

Interactionⁱ

GO - Molecular functionⁱ

Protein-protein interaction databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProt is an ELIXIR core data resource

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - D3ZG53 (D3ZG53_RAT)

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Atonal bHLH transcription factor 7

Atoh7

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

UniProt is an ELIXIR core data resource

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Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Expressionⁱ

Interactionⁱ

GO - Molecular functionⁱ

Family & Domainsⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ