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Protein
Submitted name:

Atonal bHLH transcription factor 7

Gene

Atoh7

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Atonal bHLH transcription factor 7Imported
Gene namesi
Name:Atoh7Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 20

Organism-specific databases

RGDi1304957 Atoh7

PTM / Processingi

Proteomic databases

PaxDbiD3ZG53
PRIDEiD3ZG53

Expressioni

Gene expression databases

BgeeiENSRNOG00000000384 Expressed in 4 organ(s), highest expression level in brain

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000432

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini41 – 93BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiKOG4395 Eukaryota
ENOG411269K LUCA
GeneTreeiENSGT00680000099860
InParanoidiD3ZG53
KOiK09083
OMAiHYLPFAG
OrthoDBiEOG091G0R1N
PhylomeDBiD3ZG53
TreeFamiTF315153

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR032663 Atoh7
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PANTHERiPTHR19290:SF99 PTHR19290:SF99, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZG53-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKSACKPHGP PAGARGAPPC AGAAERAVSC AGPGRLESAA RRRLAANARE
60 70 80 90 100
RRRMQGLNTA FDRLRRVVPQ WGQDKKLSKY ETLQMALSYI VALTRILAEA
110 120 130 140
ERDWVGLRCE QRGRNHPYLP FPGARLQVDP EPYGQKFFGF QPESFPMAS
Length:149
Mass (Da):16,550
Last modified:April 20, 2010 - v1
Checksum:iDF78B34078F50F3A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07044933 Genomic DNA No translation available.
RefSeqiNP_001163953.1, NM_001170482.1
UniGeneiRn.222427

Genome annotation databases

EnsembliENSRNOT00000000432; ENSRNOP00000000432; ENSRNOG00000000384
GeneIDi365564
KEGGirno:365564
UCSCiRGD:1304957 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07044933 Genomic DNA No translation available.
RefSeqiNP_001163953.1, NM_001170482.1
UniGeneiRn.222427

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000432

Proteomic databases

PaxDbiD3ZG53
PRIDEiD3ZG53

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000000432; ENSRNOP00000000432; ENSRNOG00000000384
GeneIDi365564
KEGGirno:365564
UCSCiRGD:1304957 rat

Organism-specific databases

CTDi220202
RGDi1304957 Atoh7

Phylogenomic databases

eggNOGiKOG4395 Eukaryota
ENOG411269K LUCA
GeneTreeiENSGT00680000099860
InParanoidiD3ZG53
KOiK09083
OMAiHYLPFAG
OrthoDBiEOG091G0R1N
PhylomeDBiD3ZG53
TreeFamiTF315153

Gene expression databases

BgeeiENSRNOG00000000384 Expressed in 4 organ(s), highest expression level in brain

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR032663 Atoh7
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
PANTHERiPTHR19290:SF99 PTHR19290:SF99, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZG53_RAT
AccessioniPrimary (citable) accession number: D3ZG53
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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