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Protein
Submitted name:

Zinc finger and BTB domain containing 5 (Predicted), isoform CRA_a

Gene

Zbtb5

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger and BTB domain containing 5 (Predicted), isoform CRA_aImported
Submitted name:
Zinc finger and BTB domain-containing 5Imported
Gene namesi
Name:Zbtb5Imported
Synonyms:Zbtb5_predictedImported
ORF Names:rCG_54926Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1307367 Zbtb5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSRNOG00000012726 Expressed in 9 organ(s), highest expression level in testis
ExpressionAtlasiD3ZFS3 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000017047

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 93BTBInterPro annotationAdd BLAST70
Domaini606 – 633C2H2-typeInterPro annotationAdd BLAST28
Domaini634 – 666C2H2-typeInterPro annotationAdd BLAST33

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00920000148950
KOiK10492
OMAiMMGSPRG
OrthoDBiEOG091G0570
TreeFamiTF330979

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZFS3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDFPGHFEQI FQQLNYQRLH GQLCDCVIVV GNRHFKAHRS VLAACSTHFR
60 70 80 90 100
ALFSVAEGDQ TMNMIQLDSE VVTAEAFAAL IDMMYTSTLM LGESNVMDVL
110 120 130 140 150
LAASHLHLNS VVKACKHYLT TRTLPMSPPS ERVQEQSARM QRSFMLQQLG
160 170 180 190 200
LSIVSSALSS SQSGEEPSAP MSSSMRNNLD QRTPFPMRRL HKRKQTVEER
210 220 230 240 250
ARQRLRSSMD ESAISDVTPE SGPSGVHSRE EFFSPDSLKI VDNPKPDGMA
260 270 280 290 300
DNQEDSAMMF DRPFGAQEDA QMPSQSDGSA GNMASRATQV ETSFEQEAVA
310 320 330 340 350
EKGSFQCENP EVGLGEKEHM RVVVKSEPLS SPEPQDEVSD VTSQAEGSES
360 370 380 390 400
VEVEGVVVSA EKIDLSPESS DRSFSDPQSS TDRVGDIHIL EVTNNLEHKT
410 420 430 440 450
SFSISNFLNK SRGSNFSTSQ STDDNLPNTT SDCRLEGEAP YLLSPEAGPA
460 470 480 490 500
GGPSSAPGSH VENPFSEPAD SHFVRPVQEV MGLPCVQTSG YQGEQFGMDF
510 520 530 540 550
PRSGLGLHSS FSRAMMGSPR GGASNFPYYR RIAPKMPVVT SVRSSQISEN
560 570 580 590 600
QASSQLMMNG ASSFENGHSS QPGPPQLTRA SADVLSKCKK ALSEHNVLVV
610 620 630 640 650
EGARKYACKI CCKTFLTLTD CKKHIRVHTG EKPYACLKCG KRFSQSSHLY
660 670
KHSKTTCLRW QSSNLPSTLL
Length:670
Mass (Da):73,378
Last modified:April 20, 2010 - v1
Checksum:iBA8958D8BA5134DC
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A1B0GWV5A0A1B0GWV5_RAT
Zinc finger and BTB domain-containi...
Zbtb5
74Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07048075 Genomic DNA No translation available.
CH473962 Genomic DNA Translation: EDL98801.1
CH473962 Genomic DNA Translation: EDL98802.1
RefSeqiNP_001100127.1, NM_001106657.1
XP_006238108.1, XM_006238046.3
XP_006238109.1, XM_006238047.3
XP_006238110.1, XM_006238048.3
UniGeneiRn.23809

Genome annotation databases

EnsembliENSRNOT00000017046; ENSRNOP00000017047; ENSRNOG00000012726
ENSRNOT00000092899; ENSRNOP00000075930; ENSRNOG00000012726
GeneIDi298084
KEGGirno:298084
UCSCiRGD:1307367 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07048075 Genomic DNA No translation available.
CH473962 Genomic DNA Translation: EDL98801.1
CH473962 Genomic DNA Translation: EDL98802.1
RefSeqiNP_001100127.1, NM_001106657.1
XP_006238108.1, XM_006238046.3
XP_006238109.1, XM_006238047.3
XP_006238110.1, XM_006238048.3
UniGeneiRn.23809

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000017047

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000017046; ENSRNOP00000017047; ENSRNOG00000012726
ENSRNOT00000092899; ENSRNOP00000075930; ENSRNOG00000012726
GeneIDi298084
KEGGirno:298084
UCSCiRGD:1307367 rat

Organism-specific databases

CTDi9925
RGDi1307367 Zbtb5

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00920000148950
KOiK10492
OMAiMMGSPRG
OrthoDBiEOG091G0570
TreeFamiTF330979

Gene expression databases

BgeeiENSRNOG00000012726 Expressed in 9 organ(s), highest expression level in testis
ExpressionAtlasiD3ZFS3 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PfamiView protein in Pfam
PF00651 BTB, 1 hit
SMARTiView protein in SMART
SM00225 BTB, 1 hit
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF54695 SSF54695, 1 hit
SSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50097 BTB, 1 hit
PS00028 ZINC_FINGER_C2H2_1, 1 hit
PS50157 ZINC_FINGER_C2H2_2, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZFS3_RAT
AccessioniPrimary (citable) accession number: D3ZFS3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: October 10, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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