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UniProtKB - D3ZEB4 (D3ZEB4_RAT)
Protein
Submitted name:
Zinc finger, GATA-like protein 1
Gene
Zglp1
Organism
Rattus norvegicus (Rat)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity, RNA polymerase II-specific Source: Ensembl
- sequence-specific DNA binding Source: InterPro
- zinc ion binding Source: InterPro
GO - Biological processi
- negative regulation of transcription by RNA polymerase II Source: RGD
- oocyte development Source: RGD
- positive regulation of transcription by RNA polymerase II Source: RGD
- regulation of transcription by RNA polymerase II Source: GO_Central
- spermatogenesis Source: RGD
Keywordsi
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Zinc finger, GATA-like protein 1Imported |
Gene namesi | Name:Zglp1Imported |
Organismi | Rattus norvegicus (Rat)Imported |
Taxonomic identifieri | 10116 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Rattus |
Proteomesi |
|
Organism-specific databases
RGDi | 2322460, Zglp1 |
Subcellular locationi
Nucleus
- nucleus Source: RGD
Keywords - Cellular componenti
NucleusARBA annotationExpressioni
Gene expression databases
Bgeei | ENSRNOG00000042601, Expressed in female gonad and 19 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 195 – 246 | GATA-typeInterPro annotationAdd BLAST | 52 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 32 | DisorderedSequence analysisAdd BLAST | 32 | |
Regioni | 102 – 127 | DisorderedSequence analysisAdd BLAST | 26 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 102 – 125 | Polar residuesSequence analysisAdd BLAST | 24 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationPhylogenomic databases
eggNOGi | KOG1601, Eukaryota |
GeneTreei | ENSGT00470000042444 |
HOGENOMi | CLU_088967_0_0_1 |
InParanoidi | D3ZEB4 |
OMAi | GPCWELM |
PhylomeDBi | D3ZEB4 |
Family and domain databases
CDDi | cd00202, ZnF_GATA, 1 hit |
Gene3Di | 3.30.50.10, 1 hit |
InterProi | View protein in InterPro IPR000679, Znf_GATA IPR013088, Znf_NHR/GATA |
Pfami | View protein in Pfam PF00320, GATA, 1 hit |
PRINTSi | PR00619, GATAZNFINGER |
SMARTi | View protein in SMART SM00401, ZnF_GATA, 1 hit |
PROSITEi | View protein in PROSITE PS50114, GATA_ZN_FINGER_2, 1 hit |
i Sequence
Sequence statusi: Complete.
D3ZEB4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MEAAQARDLT RPQELLAPPC LDTESLRKSR PPALEPGALR CLTPNGRSLW
60 70 80 90 100
PACQDSVSTA LPFLQEKEKG LPGSPSPATQ VLGSCWELMV IGMSDHLSMA
110 120 130 140 150
RNPKSTQCPN LETSSATSPA SLQRRPRKQL NPRMGIEKVD PRFKGVTLEF
160 170 180 190 200
QIQPDSSLQI VPTYSLPGRS CSQKLPTSPS KALASPGSTE ALGPRRCASC
210 220 230 240 250
RTQRTPLWRD AEDGTPLCNA CGIRYKKYGT RCSSCWLVPR KSIQPRRLCG
260
RCGVSQDPHL GPTQEL
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC118115 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSRNOT00000068598; ENSRNOP00000062768; ENSRNOG00000042601 |
UCSCi | RGD:2322460, rat |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC118115 Genomic DNA No translation available. |
3D structure databases
SMRi | D3ZEB4 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 10116.ENSRNOP00000062768 |
Proteomic databases
PaxDbi | D3ZEB4 |
Genome annotation databases
Ensembli | ENSRNOT00000068598; ENSRNOP00000062768; ENSRNOG00000042601 |
UCSCi | RGD:2322460, rat |
Organism-specific databases
RGDi | 2322460, Zglp1 |
Phylogenomic databases
eggNOGi | KOG1601, Eukaryota |
GeneTreei | ENSGT00470000042444 |
HOGENOMi | CLU_088967_0_0_1 |
InParanoidi | D3ZEB4 |
OMAi | GPCWELM |
PhylomeDBi | D3ZEB4 |
Gene expression databases
Bgeei | ENSRNOG00000042601, Expressed in female gonad and 19 other tissues |
Family and domain databases
CDDi | cd00202, ZnF_GATA, 1 hit |
Gene3Di | 3.30.50.10, 1 hit |
InterProi | View protein in InterPro IPR000679, Znf_GATA IPR013088, Znf_NHR/GATA |
Pfami | View protein in Pfam PF00320, GATA, 1 hit |
PRINTSi | PR00619, GATAZNFINGER |
SMARTi | View protein in SMART SM00401, ZnF_GATA, 1 hit |
PROSITEi | View protein in PROSITE PS50114, GATA_ZN_FINGER_2, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | D3ZEB4_RAT | |
Accessioni | D3ZEB4Primary (citable) accession number: D3ZEB4 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 20, 2010 |
Last sequence update: | April 20, 2010 | |
Last modified: | January 19, 2022 | |
This is version 75 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |