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Protein
Submitted name:

Zinc finger, GATA-like protein 1

Gene

Zglp1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Zinc finger, GATA-like protein 1Imported
Gene namesi
Name:Zglp1Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 8

Organism-specific databases

RGDi2322460 Zglp1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiD3ZEB4
PRIDEiD3ZEB4

Expressioni

Gene expression databases

BgeeiENSRNOG00000042601 Expressed in 9 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000062768

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini195 – 246GATA-typeInterPro annotationAdd BLAST52

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1601 Eukaryota
COG5641 LUCA
GeneTreeiENSGT00470000042444
InParanoidiD3ZEB4
OMAiVQPKRLC
OrthoDBiEOG091G0O9L
PhylomeDBiD3ZEB4

Family and domain databases

CDDicd00202 ZnF_GATA, 1 hit
Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR039355 Transcription_factor_GATA
IPR000679 Znf_GATA
IPR013088 Znf_NHR/GATA
PANTHERiPTHR10071 PTHR10071, 1 hit
PfamiView protein in Pfam
PF00320 GATA, 1 hit
PRINTSiPR00619 GATAZNFINGER
SMARTiView protein in SMART
SM00401 ZnF_GATA, 1 hit
PROSITEiView protein in PROSITE
PS50114 GATA_ZN_FINGER_2, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZEB4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEAAQARDLT RPQELLAPPC LDTESLRKSR PPALEPGALR CLTPNGRSLW
60 70 80 90 100
PACQDSVSTA LPFLQEKEKG LPGSPSPATQ VLGSCWELMV IGMSDHLSMA
110 120 130 140 150
RNPKSTQCPN LETSSATSPA SLQRRPRKQL NPRMGIEKVD PRFKGVTLEF
160 170 180 190 200
QIQPDSSLQI VPTYSLPGRS CSQKLPTSPS KALASPGSTE ALGPRRCASC
210 220 230 240 250
RTQRTPLWRD AEDGTPLCNA CGIRYKKYGT RCSSCWLVPR KSIQPRRLCG
260
RCGVSQDPHL GPTQEL
Length:266
Mass (Da):29,060
Last modified:April 20, 2010 - v1
Checksum:i868FA8146A137425
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC118115 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSRNOT00000068598; ENSRNOP00000062768; ENSRNOG00000042601
UCSCiRGD:2322460 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC118115 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000062768

Proteomic databases

PaxDbiD3ZEB4
PRIDEiD3ZEB4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000068598; ENSRNOP00000062768; ENSRNOG00000042601
UCSCiRGD:2322460 rat

Organism-specific databases

RGDi2322460 Zglp1

Phylogenomic databases

eggNOGiKOG1601 Eukaryota
COG5641 LUCA
GeneTreeiENSGT00470000042444
InParanoidiD3ZEB4
OMAiVQPKRLC
OrthoDBiEOG091G0O9L
PhylomeDBiD3ZEB4

Gene expression databases

BgeeiENSRNOG00000042601 Expressed in 9 organ(s), highest expression level in testis

Family and domain databases

CDDicd00202 ZnF_GATA, 1 hit
Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR039355 Transcription_factor_GATA
IPR000679 Znf_GATA
IPR013088 Znf_NHR/GATA
PANTHERiPTHR10071 PTHR10071, 1 hit
PfamiView protein in Pfam
PF00320 GATA, 1 hit
PRINTSiPR00619 GATAZNFINGER
SMARTiView protein in SMART
SM00401 ZnF_GATA, 1 hit
PROSITEiView protein in PROSITE
PS50114 GATA_ZN_FINGER_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZEB4_RAT
AccessioniPrimary (citable) accession number: D3ZEB4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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