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Protein
Submitted name:

Peroxisomal biogenesis factor 10

Gene

Pex10

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • protein import into peroxisome matrix Source: GO_Central

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-RNO-8866654 E3 ubiquitin ligases ubiquitinate target proteins
R-RNO-9033241 Peroxisomal protein import

Names & Taxonomyi

Protein namesi
Submitted name:
Peroxisomal biogenesis factor 10Imported
Submitted name:
RCG31325Imported
Gene namesi
Name:Pex10Imported
ORF Names:rCG_31325Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi1591776 Pex10

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZC81

Expressioni

Gene expression databases

BgeeiENSRNOG00000024012 Expressed in 10 organ(s), highest expression level in testis

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031473

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini271 – 309RING-typeInterPro annotationAdd BLAST39

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0317 Eukaryota
COG5574 LUCA
GeneTreeiENSGT00510000048446
KOiK13346
OMAiSYHGFAS
OrthoDBiEOG091G0IDS
TreeFamiTF326491

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR025654 PEX10
IPR006845 Pex_N
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR23350 PTHR23350, 1 hit
PfamiView protein in Pfam
PF04757 Pex2_Pex12, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZC81-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAQAGPPEVI RAAQKDEYYL GGLRSAAGGA LHSLAGAKKW LEWRKEIELL
60 70 80 90 100
SDIAYFGLTT IAGYQTLGEE YVGIIQVDPS RQRVPSRLRR GVLVALHAVL
110 120 130 140 150
PYLLDKALLP LEQELQAEGD GTRASQGSLL PGGRSRSGAR RWVRHHAATL
160 170 180 190 200
TEQQRRALQR AVFILRQGFA CLHRLHVAWF YIHGTFYHLA KRLAGITYLR
210 220 230 240 250
TRRLPGEDLR ACTSYRLLGL ISLLHLALSL GLQLYSFRQK QRARKEWRLH
260 270 280 290 300
RNLSHRRSSL EDRAVCRAPL CTLCLEERRH STATPCGHLF CWECITEWCN
310 320
TKTECPLCRE KFPPQKLVYL RHYR
Length:324
Mass (Da):37,112
Last modified:April 20, 2010 - v1
Checksum:i427BCA334F32A21E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134160 Genomic DNA No translation available.
CH473968 Genomic DNA Translation: EDL81284.1
RefSeqiNP_001102875.1, NM_001109405.1
UniGeneiRn.111

Genome annotation databases

EnsembliENSRNOT00000036819; ENSRNOP00000031473; ENSRNOG00000024012
GeneIDi680424
KEGGirno:680424

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC134160 Genomic DNA No translation available.
CH473968 Genomic DNA Translation: EDL81284.1
RefSeqiNP_001102875.1, NM_001109405.1
UniGeneiRn.111

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031473

Proteomic databases

PRIDEiD3ZC81

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000036819; ENSRNOP00000031473; ENSRNOG00000024012
GeneIDi680424
KEGGirno:680424

Organism-specific databases

CTDi5192
RGDi1591776 Pex10

Phylogenomic databases

eggNOGiKOG0317 Eukaryota
COG5574 LUCA
GeneTreeiENSGT00510000048446
KOiK13346
OMAiSYHGFAS
OrthoDBiEOG091G0IDS
TreeFamiTF326491

Enzyme and pathway databases

ReactomeiR-RNO-8866654 E3 ubiquitin ligases ubiquitinate target proteins
R-RNO-9033241 Peroxisomal protein import

Gene expression databases

BgeeiENSRNOG00000024012 Expressed in 10 organ(s), highest expression level in testis

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR025654 PEX10
IPR006845 Pex_N
IPR001841 Znf_RING
IPR013083 Znf_RING/FYVE/PHD
IPR017907 Znf_RING_CS
PANTHERiPTHR23350 PTHR23350, 1 hit
PfamiView protein in Pfam
PF04757 Pex2_Pex12, 1 hit
SMARTiView protein in SMART
SM00184 RING, 1 hit
PROSITEiView protein in PROSITE
PS00518 ZF_RING_1, 1 hit
PS50089 ZF_RING_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZC81_RAT
AccessioniPrimary (citable) accession number: D3ZC81
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 65 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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