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Protein
Submitted name:

Metal response element binding transcription factor 1 (Predicted)

Gene

Mtf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • positive regulation of transcription by RNA polymerase II Source: MGI

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Metal response element binding transcription factor 1 (Predicted)Imported
Submitted name:
Metal-regulatory transcription factor 1Imported
Gene namesi
Name:Mtf1Imported
Synonyms:LOC100909856Imported, Mtf1_predictedImported
ORF Names:rCG_30839Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 5

Organism-specific databases

RGDi6501193 LOC100909856
1308956 Mtf1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZBT4

Expressioni

Gene expression databases

BgeeiENSRNOG00000025724 Expressed in 10 organ(s), highest expression level in skeletal muscle tissue

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067792

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini139 – 168C2H2-typeInterPro annotationAdd BLAST30
Domaini169 – 198C2H2-typeInterPro annotationAdd BLAST30
Domaini199 – 228C2H2-typeInterPro annotationAdd BLAST30
Domaini228 – 257C2H2-typeInterPro annotationAdd BLAST30
Domaini258 – 287C2H2-typeInterPro annotationAdd BLAST30
Domaini288 – 317C2H2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144040
OMAiQEESCQC
OrthoDBiEOG091G06R4
TreeFamiTF106493

Family and domain databases

InterProiView protein in InterPro
IPR029796 Metal_TF1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR44900 PTHR44900, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 6 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 6 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 6 hits
PS50157 ZINC_FINGER_C2H2_2, 6 hits

Sequencei

Sequence statusi: Complete.

D3ZBT4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGEHSPDDNI IFFKGEEDDL TPHDKMLRFV DDNGLVPSSS GTVYDRTTVL
60 70 80 90 100
IEQDPGTLED DEDDVQCGEH LPFLVEGEEG FLIDQEAMSQ GYVQHIISPD
110 120 130 140 150
QIHLTINPGS TPMPRNIEGA TLTLQSECPE TKRKEVKRYQ CTFEGCPRTY
160 170 180 190 200
STAGNLRTHQ KTHRGEYTFV CNQEGCGKAF LTSYSLRIHV RVHTKEKPFE
210 220 230 240 250
CDVQGCEKAF NTLYRLKAHQ RLHTGKTFNC ESQGCSKYFT TLSDLRKHIR
260 270 280 290 300
THTGEKPFRC DHDGCGKAFA ASHHLKTHVR THTGERPFFC PSNGCEKTFS
310 320 330 340 350
TQYSLKSHMK GHDNKGTAYS ALPQHNGSED TNHSLYLSEL GLLSTDSELQ
360 370 380 390 400
ENSSSTQDQD LSTISPAIIF ESMFQNPDDP AIQDDPLHTA ALIDSFNGDA
410 420 430 440 450
ESVSDVPPPA GNSASLSLPL VLQPGISEPP QPLLPASTPS APPPAPSLGP
460 470 480 490 500
GSQPAAFGSP PALLQPPEVP VPHSTQFAAN HQEFLPHPQA PPQTIVPGLS
510 520 530 540 550
VVAGAPASAA TVASAVAAPA PPQSTTEPLP AMVQTLPLGA NSVLTNNPTI
560 570 580 590 600
TITPTPNTAI LQSSLVMGEQ NLQWILNGAT SSPQNQEQIQ QASKVEQVYF
610 620 630 640 650
TTAVPVASST GSSVQQIGLS VPVIIIKQEE ACQCQCACRD SAKERAAGRR
660 670
KGCSSPPPPE PNPQPPDGPS LQLPP
Length:675
Mass (Da):72,778
Last modified:April 20, 2010 - v1
Checksum:i6929A09D4D955728
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07049880 Genomic DNA No translation available.
AC142187 Genomic DNA No translation available.
CH473968 Genomic DNA Translation: EDL80405.1
RefSeqiNP_001102147.1, NM_001108677.1
XP_008762342.2, XM_008764120.2
UniGeneiRn.20005

Genome annotation databases

EnsembliENSRNOT00000031928; ENSRNOP00000031224; ENSRNOG00000025724
ENSRNOT00000072841; ENSRNOP00000067792; ENSRNOG00000050240
GeneIDi100909856
362591
KEGGirno:100909856
rno:362591
UCSCiRGD:1308956 rat

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07049880 Genomic DNA No translation available.
AC142187 Genomic DNA No translation available.
CH473968 Genomic DNA Translation: EDL80405.1
RefSeqiNP_001102147.1, NM_001108677.1
XP_008762342.2, XM_008764120.2
UniGeneiRn.20005

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000067792

Proteomic databases

PRIDEiD3ZBT4

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000031928; ENSRNOP00000031224; ENSRNOG00000025724
ENSRNOT00000072841; ENSRNOP00000067792; ENSRNOG00000050240
GeneIDi100909856
362591
KEGGirno:100909856
rno:362591
UCSCiRGD:1308956 rat

Organism-specific databases

CTDi4520
RGDi6501193 LOC100909856
1308956 Mtf1

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA
GeneTreeiENSGT00910000144040
OMAiQEESCQC
OrthoDBiEOG091G06R4
TreeFamiTF106493

Gene expression databases

BgeeiENSRNOG00000025724 Expressed in 10 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

InterProiView protein in InterPro
IPR029796 Metal_TF1
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
PANTHERiPTHR44900 PTHR44900, 1 hit
PfamiView protein in Pfam
PF00096 zf-C2H2, 6 hits
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 6 hits
SUPFAMiSSF57667 SSF57667, 4 hits
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 6 hits
PS50157 ZINC_FINGER_C2H2_2, 6 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZBT4_RAT
AccessioniPrimary (citable) accession number: D3ZBT4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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