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Entry version 97 (10 Feb 2021)
Sequence version 1 (20 Apr 2010)
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Protein

Ubiquitinyl hydrolase 1

Gene

Usp32

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

  • Thiol-dependent hydrolysis of ester, thioester, amide, peptide and isopeptide bonds formed by the C-terminal Gly of ubiquitin (a 76-residue protein attached to proteins as an intracellular targeting signal).ARBA annotation EC:3.4.19.12

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function%5Fsection">Function</a> section specifies the position(s) of the calcium-binding region(s) within the protein. One common calcium-binding motif is the EF-hand, but other calcium-binding motifs also exist.<p><a href='/help/ca_bind' target='_top'>More...</a></p>Calcium bindingi125 – 136PROSITE-ProRule annotationAdd BLAST12

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolase, Protease, Thiol proteaseARBA annotation
Biological processUbl conjugation pathwayARBA annotation
LigandCalciumPROSITE-ProRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Ubiquitinyl hydrolase 1ARBA annotation (EC:3.4.19.12ARBA annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Usp32Imported
Synonyms:Usp32_predictedImported
ORF Names:rCG_35254Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 10

Organism-specific databases

Rat genome database

More...
RGDi
1306657, Usp32

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
D3ZBB7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000027711, Expressed in brain and 21 other tissues

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
D3ZBB7, baseline and differential

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
10116.ENSRNOP00000031281

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
D3ZBB7

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini112 – 147EF-handInterPro annotationAdd BLAST36
Domaini196 – 412DUSPInterPro annotationAdd BLAST217
Domaini561 – 1394USPInterPro annotationAdd BLAST834

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1184 – 1258DisorderedSequence analysisAdd BLAST75
Regioni1311 – 1331DisorderedSequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1186 – 1230PolarSequence analysisAdd BLAST45
Compositional biasi1242 – 1257PolarSequence analysisAdd BLAST16

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1870, Eukaryota

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000155797

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001060_10_1_1

Database of Orthologous Groups

More...
OrthoDBi
1283205at2759

TreeFam database of animal gene trees

More...
TreeFami
TF324190

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR035927, DUSP-like_sf
IPR011992, EF-hand-dom_pair
IPR018247, EF_Hand_1_Ca_BS
IPR002048, EF_hand_dom
IPR038765, Papain-like_cys_pep_sf
IPR006615, Pept_C19_DUSP
IPR001394, Peptidase_C19_UCH
IPR018200, USP_CS
IPR028889, USP_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF06337, DUSP, 1 hit
PF00443, UCH, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00695, DUSP, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF143791, SSF143791, 1 hit
SSF47473, SSF47473, 1 hit
SSF54001, SSF54001, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51283, DUSP, 1 hit
PS00018, EF_HAND_1, 1 hit
PS50222, EF_HAND_2, 1 hit
PS00972, USP_1, 1 hit
PS00973, USP_2, 1 hit
PS50235, USP_3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

D3ZBB7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSQHCFIREV LGDGVPPKVA EGEKVNYEKF RNWLLLNKDA FTFSRWLLSG
60 70 80 90 100
GVYVTLTDDS DTPTFYQTLA GVTHLEESDI IDLEKRYWLL KAQSRTGRFD
110 120 130 140 150
LETFGPLVSP PIRPSLSEVC FKVFDIDRDG VLSRVELKDM VVALLEVWKD
160 170 180 190 200
NRTDDIPMGH LTLEDYQIWS VKNVLANEFL NLLFQVCHIV LGLRPATPEE
210 220 230 240 250
EGQIIRGWLE RESRYGLQPG HNWFIISMQW WQQWKEYVKY DANPVVIEPS
260 270 280 290 300
SVLNGGKFSF GTTAHPIEHG EDRISNNLSY MNTTEEKYSD NISSASEASE
310 320 330 340 350
STGSGFLYSA TPGADMCFAR QHNTSDNNNQ CLLGANGNIL LHLNPQKPGA
360 370 380 390 400
IDNQPLVTQE PVKATSLTLE GGRLKRTPQL IHGRDYEMVP EPVWRALYHW
410 420 430 440 450
YGSNLALPRP VIKNSKTDIP ELELFPRYLL FLRQQPATRT QQSNIWVNMG
460 470 480 490 500
NVPSPNAPLK RVLAYTGCFS RMQTIKEIHE YLSQRLRIKE EDMRLWLYNS
510 520 530 540 550
ENYLTLLDDE DHRLEYLKIQ DEQHLVIEVR NKDMSWPEEM SFIANSSKID
560 570 580 590 600
RHKVPTEKGA TGLSNLGNTC FMNSSIQCVS NTQPLTQYFI SGRHLYELNR
610 620 630 640 650
TNPIGMKGHM AKCYGDLVQE LWSGTQKNVA PLKLRWTIAK YAPRFNGFQQ
660 670 680 690 700
QDSQELLAFL LDGLHEDLNR VHEKPYVELK DSDGRPDWEV AAEAWDNHLR
710 720 730 740 750
RNRSIVVDLF HGQLRSQVKC KTCGHISVRF DPFNFLSLPL PMDSYMHLEI
760 770 780 790 800
TVIKLDGTTP IRYGLRLNMD EKYTGLKKQL SDLCGLKSEQ ILFAEVHSSN
810 820 830 840 850
IKNFPQDNQK VRLSVSGFLC AFEIPIPASP VSACSPIQTD CSSSPSTNGL
860 870 880 890 900
FTVTTNGDLP RPIFIPNGMP NTVVPCGTEK NATNGIVNGH MPPLPDDPFT
910 920 930 940 950
GYIIAVHRKM MRTELYFLSS QKNRPSLFGM PLIVPCTVHT RKKDLYDAVW
960 970 980 990 1000
IQVSRLASPL PPQEASNHAQ DCDDSMGYQY PFTLRVVQKD GNSCAWCPWY
1010 1020 1030 1040 1050
RFCRGCKIDC GEDRAFIGNA CIAVDWDPTA LHLRYQTSQE RVVEEHESVE
1060 1070 1080 1090 1100
QSRRAQAEPI NLDSCLRAFT SEEELGENEM YYCSKCKTHC LATKKLDLWR
1110 1120 1130 1140 1150
LPPILIIHLK RFQFVNGRWI KSQKIVKFPR ESFDPSAFLV PRDPTLCQHK
1160 1170 1180 1190 1200
PLTPQGDDVS ELPIPAGDVK KVDVQNPAGE EDVLLSKSPS SLSANITSSP
1210 1220 1230 1240 1250
KGSPSSSRKS GASCPSSKNS SPNSSPRTLG RNKGRLRLPQ IGSKNKLSSS
1260 1270 1280 1290 1300
KENLDASREN GAGQICELAD TLNRGHVLGG SQPELVTPLD HEITLANGFL
1310 1320 1330 1340 1350
YEHETCGNGY SNGQLGNHSE EDSTDDQRED THSKPIYNLY AISCHSGILG
1360 1370 1380 1390 1400
GGHYVTYAKN PNCKWYCYND SSCKELHPDE IDTDSAYILF YEQQGIDCAQ
1410 1420 1430
FLPKIDGKKM ADTSSMDEDF ESDYKKYCVL Q
Length:1,431
Mass (Da):161,921
Last modified:April 20, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i621FA96A7F07E628
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A0G2K952A0A0G2K952_RAT
Ubiquitinyl hydrolase 1
Usp32
1,640Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AABR07030156 Genomic DNA No translation available.
AABR07030157 Genomic DNA No translation available.
AABR07030158 Genomic DNA No translation available.
AABR07030159 Genomic DNA No translation available.
AABR07030160 Genomic DNA No translation available.
AABR07030161 Genomic DNA No translation available.
AABR07030162 Genomic DNA No translation available.
CH473948 Genomic DNA Translation: EDM05538.1

NCBI Reference Sequences

More...
RefSeqi
NP_001100502.1, NM_001107032.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000036814; ENSRNOP00000031281; ENSRNOG00000027711

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
303394

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
rno:303394

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07030156 Genomic DNA No translation available.
AABR07030157 Genomic DNA No translation available.
AABR07030158 Genomic DNA No translation available.
AABR07030159 Genomic DNA No translation available.
AABR07030160 Genomic DNA No translation available.
AABR07030161 Genomic DNA No translation available.
AABR07030162 Genomic DNA No translation available.
CH473948 Genomic DNA Translation: EDM05538.1
RefSeqiNP_001100502.1, NM_001107032.1

3D structure databases

SMRiD3ZBB7
ModBaseiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000031281

Proteomic databases

PRIDEiD3ZBB7

Genome annotation databases

EnsembliENSRNOT00000036814; ENSRNOP00000031281; ENSRNOG00000027711
GeneIDi303394
KEGGirno:303394

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
84669
RGDi1306657, Usp32

Phylogenomic databases

eggNOGiKOG1870, Eukaryota
GeneTreeiENSGT00940000155797
HOGENOMiCLU_001060_10_1_1
OrthoDBi1283205at2759
TreeFamiTF324190

Gene expression databases

BgeeiENSRNOG00000027711, Expressed in brain and 21 other tissues
ExpressionAtlasiD3ZBB7, baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR035927, DUSP-like_sf
IPR011992, EF-hand-dom_pair
IPR018247, EF_Hand_1_Ca_BS
IPR002048, EF_hand_dom
IPR038765, Papain-like_cys_pep_sf
IPR006615, Pept_C19_DUSP
IPR001394, Peptidase_C19_UCH
IPR018200, USP_CS
IPR028889, USP_dom
PfamiView protein in Pfam
PF06337, DUSP, 1 hit
PF00443, UCH, 1 hit
SMARTiView protein in SMART
SM00695, DUSP, 1 hit
SUPFAMiSSF143791, SSF143791, 1 hit
SSF47473, SSF47473, 1 hit
SSF54001, SSF54001, 1 hit
PROSITEiView protein in PROSITE
PS51283, DUSP, 1 hit
PS00018, EF_HAND_1, 1 hit
PS50222, EF_HAND_2, 1 hit
PS00972, USP_1, 1 hit
PS00973, USP_2, 1 hit
PS50235, USP_3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD3ZBB7_RAT
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D3ZBB7
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: February 10, 2021
This is version 97 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Proteomics identificationCombined sources, Reference proteomeImported
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