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Protein
Submitted name:

ElaC homolog 1 (E. coli) (Predicted), isoform CRA_b

Gene

Elac1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • 3'-tRNA processing endoribonuclease activity Source: GO_Central

Names & Taxonomyi

Protein namesi
Submitted name:
ElaC homolog 1 (E. coli) (Predicted), isoform CRA_bImported
Submitted name:
ElaC ribonuclease Z 1Imported
Gene namesi
Name:Elac1Imported
Synonyms:Elac1_predictedImported
ORF Names:rCG_46671Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 18

Organism-specific databases

RGDi1304757 Elac1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiD3ZB91

Expressioni

Gene expression databases

BgeeiENSRNOG00000000113 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000125

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini20 – 75Lactamase_BInterPro annotationAdd BLAST56
Domaini244 – 313Lactamase_BInterPro annotationAdd BLAST70

Phylogenomic databases

eggNOGiKOG2121 Eukaryota
COG1234 LUCA
GeneTreeiENSGT00730000111224
KOiK00784
OMAiGTQRQMM
OrthoDBiEOG091G0KQW
TreeFamiTF324462

Family and domain databases

CDDicd07717 RNaseZ_ZiPD-like_MBL-fold, 1 hit
Gene3Di3.60.15.10, 1 hit
HAMAPiMF_01818 RNase_Z_BN, 1 hit
InterProiView protein in InterPro
IPR001279 Metallo-B-lactamas
IPR036866 RibonucZ/Hydroxyglut_hydro
IPR013471 RNase_Z/BN
PfamiView protein in Pfam
PF00753 Lactamase_B, 1 hit
PF12706 Lactamase_B_2, 1 hit
SUPFAMiSSF56281 SSF56281, 1 hit
TIGRFAMsiTIGR02651 RNase_Z, 1 hit

Sequencei

Sequence statusi: Complete.

D3ZB91-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSMDVTFLGT GAAYPSPTRG ASAVVLRCEG ECWLFDCGEG TQTQLMKSQL
60 70 80 90 100
KAGRITKIFI THLHGDHFFG LPGLLCTISL QSGSVVSRQP IEIYGPVGLR
110 120 130 140 150
DFIWRTMELS HTELVFPYVV HELVPTADQC PVEELRESAQ MDEADSSPKG
160 170 180 190 200
QGRTILLDAE ENSYCLVDDE QFVVKAFRLF HRIPSFGFSV VEKKRTGKLS
210 220 230 240 250
AQKLRDLGVP PGPAYGKLKN GISVVLDNGV TISPQDVLKK PMVGRKVCIL
260 270 280 290 300
GDCSGVVGDG GVKLCFEADL LIHEATLDDS QMDKAKEHGH STPQMAATFA
310 320 330 340 350
KLCRAKRLVL THFSQRYKPT ALAREGEADG ITELKKQAES VLELQEVTLA
360
EDFMVIGIPI KK
Length:362
Mass (Da):39,680
Last modified:April 20, 2010 - v1
Checksum:iAE6D20F2D47EF549
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07032518 Genomic DNA No translation available.
CH473971 Genomic DNA Translation: EDM14801.1
RefSeqiNP_001100876.1, NM_001107406.1
UniGeneiRn.37959

Genome annotation databases

EnsembliENSRNOT00000000125; ENSRNOP00000000125; ENSRNOG00000000113
GeneIDi307604
KEGGirno:307604

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07032518 Genomic DNA No translation available.
CH473971 Genomic DNA Translation: EDM14801.1
RefSeqiNP_001100876.1, NM_001107406.1
UniGeneiRn.37959

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000000125

Proteomic databases

PRIDEiD3ZB91

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000000125; ENSRNOP00000000125; ENSRNOG00000000113
GeneIDi307604
KEGGirno:307604

Organism-specific databases

CTDi55520
RGDi1304757 Elac1

Phylogenomic databases

eggNOGiKOG2121 Eukaryota
COG1234 LUCA
GeneTreeiENSGT00730000111224
KOiK00784
OMAiGTQRQMM
OrthoDBiEOG091G0KQW
TreeFamiTF324462

Gene expression databases

BgeeiENSRNOG00000000113 Expressed in 9 organ(s), highest expression level in skeletal muscle tissue

Family and domain databases

CDDicd07717 RNaseZ_ZiPD-like_MBL-fold, 1 hit
Gene3Di3.60.15.10, 1 hit
HAMAPiMF_01818 RNase_Z_BN, 1 hit
InterProiView protein in InterPro
IPR001279 Metallo-B-lactamas
IPR036866 RibonucZ/Hydroxyglut_hydro
IPR013471 RNase_Z/BN
PfamiView protein in Pfam
PF00753 Lactamase_B, 1 hit
PF12706 Lactamase_B_2, 1 hit
SUPFAMiSSF56281 SSF56281, 1 hit
TIGRFAMsiTIGR02651 RNase_Z, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3ZB91_RAT
AccessioniPrimary (citable) accession number: D3ZB91
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: November 7, 2018
This is version 69 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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