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Entry version 64 (05 Dec 2018)
Sequence version 3 (22 Jul 2015)
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Protein
Submitted name:

Protein piccolo

Gene

Pclo

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Protein piccoloImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:PcloImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRattus norvegicus (Rat)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10116 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002494 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 4

Organism-specific databases

Rat genome database

More...
RGDi
69406 Pclo

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
D3Z9C7

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSRNOG00000005726 Expressed in 8 organ(s), highest expression level in brain

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
D3Z9C7 baseline and differential

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
D3Z9C7

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini3153 – 3247PDZInterPro annotationAdd BLAST95
Domaini3364 – 3463C2InterPro annotationAdd BLAST100

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili432 – 466Sequence analysisAdd BLAST35
Coiled coili564 – 584Sequence analysisAdd BLAST21
Coiled coili1865 – 1885Sequence analysisAdd BLAST21
Coiled coili1938 – 1969Sequence analysisAdd BLAST32
Coiled coili2420 – 2457Sequence analysisAdd BLAST38
Coiled coili3565 – 3585Sequence analysisAdd BLAST21

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG2060 Eukaryota
ENOG410ZNB1 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00620000087961

TreeFam database of animal gene trees

More...
TreeFami
TF326082

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.150, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000008 C2_dom
IPR035892 C2_domain_sf
IPR001478 PDZ
IPR036034 PDZ_sf
IPR030629 Piccolo

The PANTHER Classification System

More...
PANTHERi
PTHR14113:SF6 PTHR14113:SF6, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00168 C2, 1 hit
PF00595 PDZ, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00239 C2, 1 hit
SM00228 PDZ, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50156 SSF50156, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50004 C2, 1 hit
PS50106 PDZ, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

D3Z9C7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
EKEEDKSDTS SSQQPKSPQG LSDTGYSSDG ISGSLGEIPS LIPSDEKDLL
60 70 80 90 100
KGLKKDSFSQ ESSPSSPSDL AKLESTVLSI LEAQASTLVG EKAEKKTQPQ
110 120 130 140 150
KISPEKPQDQ QKTQTASETL DITISEEEIK ESQEKKVSPK KDSEQGFPSR
160 170 180 190 200
KEHKEKPELV DDLSPRRASY DSVEDSSESE NSPVVRRKRR TSIGSSSSDE
210 220 230 240 250
YKQEDSQGSG EEEDFIRKQI IEMSADEDAS GSEDEEFIRS QLKEISGVGE
260 270 280 290 300
SQKREEAKGK GKGVAGKHRR LTRKSSTSFD DDAGRRHSWH DEDDETFDES
310 320 330 340 350
PELKFRETKS QESEELVVAG GGGLRRFKTI ELNSTIADKY SSESSQKKTI
360 370 380 390 400
LYFDEEPELE MESLTDSPED RSRGEGSSSL HASSFTPGTS PTSVSSLDED
410 420 430 440 450
SDSSPSHKKG ESKQQRKARH RSHGPLLPTI EDSSEEEELR EEEELLKEQE
460 470 480 490 500
KQRELEQQQR KSSSKKSKKD KDELRAQRRR ERPKTPPSNL SPIEDASPTE
510 520 530 540 550
ELRQAAEMEE LHRSSCSEYS PSIESDPEGF EISPEKIIEV QKVYKLPAAV
560 570 580 590 600
SLYSPTDEQS VMQKEGVQKA LKSAEEMYEE MMQKPHKYKA FPAANERDEV
610 620 630 640 650
FEKEPLYGGM LIEDYIYESL VEDTYNGSVD GSLLTRQEEQ NGFMQQRGRE
660 670 680 690 700
QKVRLQEQIY DDPMQKISDL QKEFYELESL HSVVPQEDIV SSSYIIPESH
710 720 730 740 750
EIVDLGSMVM STSEEKKLLD ADSAYEELMR RQQVQVTDGS SPVQTTIGDD
760 770 780 790 800
MAESTLDFDR VQDASLTSSI LSGASLTDST SSATLSIPDV KITQHFSAEE
810 820 830 840 850
LEDEYVTDYT REIQEIIAHE SLILTYSEPS ESATSVPPSD TPSLTSSISS
860 870 880 890 900
VCTTDSSSPV TTLDSLTTVY TEPADVMTKF KDSEEISSTY FPGSIIDYPE
910 920 930 940 950
DISVSLDRTI MPESRTNEDQ IVLSFSGMAP SVVESVGTKP ERPQADTIST
960 970 980 990 1000
DLPISEKDLI KGKKETGDGI ILEVLDAYKD KREESEAELT KISLPEPGLA
1010 1020 1030 1040 1050
QAPSSVTAPQ IKEQHVSPHS VSGKISGQEK PTYRLPSGSL PVSTHPSKSR
1060 1070 1080 1090 1100
PFFRSSSLDI SAQPPPPPPP PPPPSTSSPP PPPPLPPATS PKPPTYPKKK
1110 1120 1130 1140 1150
LAVAATVTST TIVTTHVDAL TTVEAAAARR SNGLPATKMC ATAPPPVPPK
1160 1170 1180 1190 1200
PSQIPTGLVF THRPEAIKPP IAPKPAVPQI PVTTQKPTDT CPKPTGLSLT
1210 1220 1230 1240 1250
STMSLNLVTS ADYKLPSPTS PLSPHSNKSS PRYSKSLMDT YVVITLPSEP
1260 1270 1280 1290 1300
GTPTDSSAQA ITSWPLGSPP KDLVSLETVF SVVPPMTATE IPSASQPTLY
1310 1320 1330 1340 1350
ASGALGTFSA GPAVTPSLFQ TVPTPLTQFL PAEVSKPEVS AVRSTVPSVA
1360 1370 1380 1390 1400
PRSVSIPIPP EPLALDRHQY KENGKLPLVG DAIDLRTIPK TEEKATEKCM
1410 1420 1430 1440 1450
DLSASAVDVK RQTTVNEVYR RQISAVQPSI INLSAASSLV TPITMDSKTV
1460 1470 1480 1490 1500
AVVTCTDTTV YTTGTESQGG IEHAVTSPLQ LTTSKHTELP YRKPSSQAFP
1510 1520 1530 1540 1550
TIRDEAPINL SLGPSAQAVM LAVTKPVTVP PVGVTNGWTD STLSQGVADG
1560 1570 1580 1590 1600
EVVDLSTSKS HRTVVTMDES TSNVVTKIIE DDEKPVDLTA GRRAVCCDMV
1610 1620 1630 1640 1650
YTLPFGRSCT AQQPATTLPE DRFGYRDDHY QYDRSGPYGY RGIGGMKPSM
1660 1670 1680 1690 1700
SDTNLAEAGH FFYKSKNAFD YSGGTGAAVD LTSGRVSTGE VMDYSSKTTG
1710 1720 1730 1740 1750
PYPETRQVIS GVGISTPQYS TARMTPPPGP QYGVGSVLRS SNGVVYSSVA
1760 1770 1780 1790 1800
TPIPSTFAIT TQPGSIFSTT VRDLSGIPTT DAMTSLSALH QSQPMPRSYF
1810 1820 1830 1840 1850
ITTGASETDI AVTGIDINAS LQTITMETLP AEAMDSVPTL TTASEVFSEV
1860 1870 1880 1890 1900
VGEESTLLIV PDEDKQQQQL DLERELLELE KIKQQRFAEE LEWERQEIQR
1910 1920 1930 1940 1950
FREQEKIMVQ KKLEELQSMK QHLLYQQEEE RQAQFMMRQE TLAQQQLQLE
1960 1970 1980 1990 2000
QIQQLQQQLH QQLEEQKLRQ IYQYNYDPSG TSSPQTTTEQ AILEGQYAAT
2010 2020 2030 2040 2050
EGSQFWATED ATTTASTVVA IEIPQSQGWY TVQSDGVTQY IAPPGILSTV
2060 2070 2080 2090 2100
SEIPLTDVVV KEEKQPKKRS SGAKVRGQYD EMGESVADDP RNLKKIVDSG
2110 2120 2130 2140 2150
VQTDDEETAD RSYASRRRRT KKSVDTSVQT DDEDQDEWDM PSRSRRKART
2160 2170 2180 2190 2200
GKYGDSTAEG DKTKPLSKVS SVAVQTVAEI SVQTEPVGTI RTPSIRARVD
2210 2220 2230 2240 2250
AKVEIIKHIS APEKTYKGGS LGCQTETDSD TQSPPYLGAT SPPKDKKRPT
2260 2270 2280 2290 2300
PLEIGYSSSH LRADPTVQLA PSPPKSPKVL YSPISPLSPG NALEPAFVPY
2310 2320 2330 2340 2350
EKPLPDDISP QKVLHPDMAK VPPASPKTAK MMQRSMSDPK PLSPTADESS
2360 2370 2380 2390 2400
RAPFQYSEGF TTKGSQTMTA SGTQKKVKRT LPNPPPEEVS TGTQSTYSTM
2410 2420 2430 2440 2450
GTASRRRMCR TNTMARAKIL QDIDRELDLV ERESAKLRKK QAELDEEEKE
2460 2470 2480 2490 2500
IDAKLRYLEM GINRRKEALL KEREKRERAY LQGVAEDRDY MSDSEVSSTR
2510 2520 2530 2540 2550
PSRVESQHGV ERPRTAPQTE FSQFIPPQTQ TEAQLVPPTS PYTQYQYSSP
2560 2570 2580 2590 2600
ALPTQAPTPY TQQSHFQQQT LYHQQVSPYQ TQPTFQAVAT MSFTPQAQPT
2610 2620 2630 2640 2650
PTPQPSYQLP SQMMVIQQKP RQTTLYLEPK ITSNYEVIRN QPLMIAPVST
2660 2670 2680 2690 2700
DNTYAVSHLG SKYNSLDLRI GLEERSSMAS SPISSISADS FYADIDHHTS
2710 2720 2730 2740 2750
RNYVLIDDIG DITKGTAALS TAFSLHEKDL SKTDRLLRTT ETRRSQEVTD
2760 2770 2780 2790 2800
FLAPLQTSSR LHSYVKAEED PMEDPYELKL LKHQIKQEFR RGTESLDHLA
2810 2820 2830 2840 2850
GLSHYYHADT SYRHFPKSEK YSISRLTLEK QAAKQLPAAI LYQKQSKHKK
2860 2870 2880 2890 2900
SLIDPKMSKF SPIQESRDLE PDYPTYMSSG TSSIGGISSR ARLLQDDITF
2910 2920 2930 2940 2950
GLRKNITDQQ KFMGSSLGSG LGTLGNTIRS ALQDEADKPY SSGSRSRPSS
2960 2970 2980 2990 3000
RPSSVYGLDL SIKRDSSSSS LRLKAQEAEA LDVSFGHSSS SARTKPTSLP
3010 3020 3030 3040 3050
ISQSRGRIPI VAQNSEEESP LSPVGQPMGM ARAAAGPLPP ISADTRDQFG
3060 3070 3080 3090 3100
SSHSLPEVQQ HMREESRTRG YDRDIAFIMD DFQHAMSDSE AYHLRREETD
3110 3120 3130 3140 3150
WFDKPRESRL ENGHGLDRKL PERLVHSRPL SQHQEQILQM NGKTIHYIFP
3160 3170 3180 3190 3200
HARIKITRDS KDHTVSGNGL GIRIVGGKEI PGHSGEIGAY IAKILPGGSA
3210 3220 3230 3240 3250
EHTGKLMEGM QVLEWNGVPL TSKTYEEVQS IINQQSGEAE ICVRLDLNML
3260 3270 3280 3290 3300
SDSENPQHLE LHEPPKVDKA KSPGVDPKQL AAELQKVSLQ QSPLVMSSVV
3310 3320 3330 3340 3350
EKGSHAHSGP TSAGSSSVPS PGQPGSPSVS KKKHSSTKPT DATKAASHPI
3360 3370 3380 3390 3400
TGEIQLQINY DLGNLIIHIL QARNLVPRDN NGYSDPFVKV YLLPGRGQVM
3410 3420 3430 3440 3450
VVQNASAEYK RRTKYVQKSL NPEWNQTVIY KSISMEQLMK KTLEVTVWDY
3460 3470 3480 3490 3500
DRFSSNDFLG EVLIDLSSTS HLDNTPRWYP LKEQTESIDH GKSHSSQNSQ
3510 3520 3530 3540 3550
QSPKPSVIKS RSHGIFPDPS KDMQVPTIEK SHSSPGSSKS SSEGHLRSHG
3560 3570 3580 3590
PSRSQSKTSV AQTHLEDAGV AIAAAEAAVQ QLRIQPSKRR K
Length:3,591
Mass (Da):395,343
Last modified:July 22, 2015 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i8CD9B04217E0A43D
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9JKS6PCLO_RAT
Protein piccolo
Pclo
5,085Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
F1M7V4F1M7V4_RAT
Protein piccolo
Pclo
3,896Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AABR07059349 Genomic DNA No translation available.
AABR07059350 Genomic DNA No translation available.
AABR07059351 Genomic DNA No translation available.
AABR07059352 Genomic DNA No translation available.
AABR07059353 Genomic DNA No translation available.
AABR07059354 Genomic DNA No translation available.
AABR07059355 Genomic DNA No translation available.
AABR07059356 Genomic DNA No translation available.
AABR07059357 Genomic DNA No translation available.
AABR07059358 Genomic DNA No translation available.

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRNOT00000008637; ENSRNOP00000008637; ENSRNOG00000005726

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AABR07059349 Genomic DNA No translation available.
AABR07059350 Genomic DNA No translation available.
AABR07059351 Genomic DNA No translation available.
AABR07059352 Genomic DNA No translation available.
AABR07059353 Genomic DNA No translation available.
AABR07059354 Genomic DNA No translation available.
AABR07059355 Genomic DNA No translation available.
AABR07059356 Genomic DNA No translation available.
AABR07059357 Genomic DNA No translation available.
AABR07059358 Genomic DNA No translation available.

3D structure databases

SMRiD3Z9C7
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiD3Z9C7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRNOT00000008637; ENSRNOP00000008637; ENSRNOG00000005726

Organism-specific databases

RGDi69406 Pclo

Phylogenomic databases

eggNOGiKOG2060 Eukaryota
ENOG410ZNB1 LUCA
GeneTreeiENSGT00620000087961
TreeFamiTF326082

Gene expression databases

BgeeiENSRNOG00000005726 Expressed in 8 organ(s), highest expression level in brain
ExpressionAtlasiD3Z9C7 baseline and differential

Family and domain databases

Gene3Di2.60.40.150, 1 hit
InterProiView protein in InterPro
IPR000008 C2_dom
IPR035892 C2_domain_sf
IPR001478 PDZ
IPR036034 PDZ_sf
IPR030629 Piccolo
PANTHERiPTHR14113:SF6 PTHR14113:SF6, 1 hit
PfamiView protein in Pfam
PF00168 C2, 1 hit
PF00595 PDZ, 1 hit
SMARTiView protein in SMART
SM00239 C2, 1 hit
SM00228 PDZ, 1 hit
SUPFAMiSSF50156 SSF50156, 1 hit
PROSITEiView protein in PROSITE
PS50004 C2, 1 hit
PS50106 PDZ, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD3Z9C7_RAT
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D3Z9C7
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: July 22, 2015
Last modified: December 5, 2018
This is version 64 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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