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UniProtKB - D3Z6S9 (ERIP6_MOUSE)

Entry version 50 (08 May 2019)
Sequence version 1 (20 Apr 2010)
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Protein

Glutamate-rich protein 6

Gene

Erich6

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Glutamate-rich protein 6
Alternative name(s):
Protein FAM194A
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:Erich6
Synonyms:Fam194a
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMus musculus (Mouse)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri10090 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Myomorpha › Muroidea › Muridae › Murinae › Mus › Mus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000589 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3

Organism-specific databases

Mouse genome database (MGD) from Mouse Genome Informatics (MGI)

More...MGIi		MGI:3588212 Erich6

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00003951031 – 713Glutamate-rich protein 6Add BLAST713

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...PaxDbi		D3Z6S9

PRoteomics IDEntifications database

More...PRIDEi		D3Z6S9

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...iPTMneti		D3Z6S9

Comprehensive resource for the study of protein post-translational modifications (PTMs) in human, mouse and rat.

More...PhosphoSitePlusi		D3Z6S9

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...Bgeei		ENSMUSG00000070471 Expressed in 65 organ(s), highest expression level in testis

Genevisible search portal to normalized and curated expression data from Genevestigator

More...Genevisiblei		D3Z6S9 MM

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...STRINGi		10090.ENSMUSP00000040882

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi28 – 75Glu-richAdd BLAST48

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ERICH6 family.Curated

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...eggNOGi		ENOG410IITW Eukaryota
ENOG4111TGA LUCA

Ensembl GeneTree

More...GeneTreei		ENSGT00940000153655

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...HOGENOMi		HOG000111364

InParanoid: Eukaryotic Ortholog Groups

More...InParanoidi		D3Z6S9

Identification of Orthologs from Complete Genome Data

More...OMAi		FCGSDLR

Database of Orthologous Groups

More...OrthoDBi		866189at2759

Database for complete collections of gene phylogenies

More...PhylomeDBi		D3Z6S9

TreeFam database of animal gene trees

More...TreeFami		TF333451

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR029281 FAM194_C

Pfam protein domain database

More...Pfami		View protein in Pfam
PF14977 FAM194, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

D3Z6S9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRPRQGVRKP GKRNTKSKKP DKASKGKEMV EAEKAQKMQR EQGEELEQEG 
        60         70         80         90        100
QEEEVEEEEK EEEAKEEQGA QEEQEGQGAQ GVQGWDDREG QPQESQNLFP 
       110        120        130        140        150
ESLNEEDIWK AIGPSEGFDE DSPEFRPRLI SVVSPSLSTM SPPSKVSSPS 
       160        170        180        190        200
WGEEEPLPLP HREGSPPASS SGSSHKSYPK IFQTFKKDLS EVTVDRDMYP 
       210        220        230        240        250
SLYERVQMSV QTEDESWLQR ISAKKQIKRI PSIEITETLP QTQASMLREN 
       260        270        280        290        300
WVINPEEPKL SILCEMEFNE DFVNLFETSL RTLPSVGPPA ILSFRKEYSY 
       310        320        330        340        350
MDVNFKDEQE LEPTCEFCGS DLRSLFFKMD TSSENIQTKP KSYRCCCLQF 
       360        370        380        390        400
QNLLDYINEE MLTIKPPALE LISISPHAAY GSDIDRLKAK EKALQKKQER 
       410        420        430        440        450
QMARHFAIIS HDQSPTTTDD GKTFVTDALE IQKTYSQNSI TQREAGNILK 
       460        470        480        490        500
YSFPCSAFPS WLNFTCEQSV CTDLIHTEMR CSVYFGFDAS VDGTILLTYP 
       510        520        530        540        550
SGNLAIIRLP NKTDGFICII QEDTPTNPTI LALFDSSGRS SCYHPNGNVW 
       560        570        580        590        600
VYINILGGQY SDQAGNRIRT WNWSSTMPSS SFVSFKPVFL ALNRYIGIRI 
       610        620        630        640        650
LEQDKVSINF LAMGQQATIS LGTKVMLHDP EEVPALWFLS GDDLLLLANL 
       660        670        680        690        700
IKIRRLFNKL EGCMNFPISQ AWEKLKQPPY LSSLSLKLLA LCHNSGIQQK 
       710 
TMETIIDLIK EEE
Length:713
Mass (Da):80,949
Last modified:April 20, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i64DD9F6BD5460AF4
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
AC119873 Genomic DNA No translation available.

The Consensus CDS (CCDS) project

More...CCDSi		CCDS50914.1

NCBI Reference Sequences

More...RefSeqi		NP_001074731.1, NM_001081262.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...Ensembli		ENSMUST00000041115; ENSMUSP00000040882; ENSMUSG00000070471

Database of genes from NCBI RefSeq genomes

More...GeneIDi		545527

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...KEGGi		mmu:545527

UCSC genome browser

More...UCSCi		uc008phy.1 mouse

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC119873 Genomic DNA No translation available.
CCDSiCCDS50914.1
RefSeqiNP_001074731.1, NM_001081262.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000040882

PTM databases

iPTMnetiD3Z6S9
PhosphoSitePlusiD3Z6S9

Proteomic databases

PaxDbiD3Z6S9
PRIDEiD3Z6S9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000041115; ENSMUSP00000040882; ENSMUSG00000070471
GeneIDi545527
KEGGimmu:545527
UCSCiuc008phy.1 mouse

Organism-specific databases

Comparative Toxicogenomics Database

More...CTDi		131831
MGIiMGI:3588212 Erich6

Phylogenomic databases

eggNOGiENOG410IITW Eukaryota
ENOG4111TGA LUCA
GeneTreeiENSGT00940000153655
HOGENOMiHOG000111364
InParanoidiD3Z6S9
OMAiFCGSDLR
OrthoDBi866189at2759
PhylomeDBiD3Z6S9
TreeFamiTF333451

Miscellaneous databases

Protein Ontology

More...PROi		PR:D3Z6S9

The Stanford Online Universal Resource for Clones and ESTs

More...SOURCEi		Search...

Gene expression databases

BgeeiENSMUSG00000070471 Expressed in 65 organ(s), highest expression level in testis
GenevisibleiD3Z6S9 MM

Family and domain databases

InterProiView protein in InterPro
IPR029281 FAM194_C
PfamiView protein in Pfam
PF14977 FAM194, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiERIP6_MOUSE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D3Z6S9
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 15, 2010
Last sequence update: April 20, 2010
Last modified: May 8, 2019
This is version 50 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
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