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Protein
Submitted name:

RIKEN cDNA 2610020H08, isoform CRA_h

Gene

Rexo5

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RIKEN cDNA 2610020H08, isoform CRA_hImported
Submitted name:
RNA exonuclease 5Imported
Gene namesi
Name:Rexo5Imported
Synonyms:2610020H08RikImported
ORF Names:mCG_5791Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 7

Organism-specific databases

MGIiMGI:1919402 Rexo5

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSMUSG00000030924

Interactioni

Protein-protein interaction databases

IntActiD3Z3J7, 1 interactor

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini297 – 371RRMInterPro annotationAdd BLAST75

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili370 – 390Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG2248 Eukaryota
COG0847 LUCA
GeneTreeiENSGT00920000149175
HOGENOMiHOG000015091

Family and domain databases

CDDicd06145 REX1_like, 1 hit
Gene3Di3.30.420.10, 1 hit
3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR013520 Exonuclease_RNaseT/DNA_pol3
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034922 REX1-like_exo
IPR012337 RNaseH-like_sf
IPR036397 RNaseH_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00479 EXOIII, 1 hit
SM00360 RRM, 1 hit
SUPFAMiSSF53098 SSF53098, 1 hit
SSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

D3Z3J7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFHFPLPG SPNYENFILT KYTGFITDSS PLFGLDCEVC LTSMGKELTR
60 70 80 90 100
ISLVTEGGYC LIDELVKPDL KILDYLTSFT GITKEILNPV TTKLKDVQKL
110 120 130 140 150
LRELLPPDAV LVGHCLDLDL RVLKMIHPYV IDTSLLYAGK QGRRFKLTFL
160 170 180 190 200
ARVILGKDIQ CPNKLGRDGI EDARAALELL QYFLKYGPKK IAEFNLEALA
210 220 230 240 250
ANQEQGDKEE AAHMSVLKCL ESMGQKLLFL TQDINELSSY RNCQTIKCSS
260 270 280 290 300
NKKVLEQARV EVPLFPFNIV EFSFQPFPPL FAEEMKNSMK TKWTQMSTVY
310 320 330 340 350
AGPFSKDCNV GALKKVFSSL GPVHSITLVL ETYRPYFSIQ YEVLEAAQLA
360 370 380 390 400
LETMNGSLLE GSCIRVRRLV TELTLECDTL VRELEQDSEN QGTIYVAGIG
410 420 430 440
ETFKEHLLEQ SNLFPDLEAV ILPKEVKSRK QKNYCFLMLL GRTLA
Length:445
Mass (Da):50,262
Last modified:April 20, 2010 - v1
Checksum:i7254D5CAD2430973
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC122423 Genomic DNA No translation available.
AC164158 Genomic DNA No translation available.
CH466531 Genomic DNA Translation: EDL17193.1
RefSeqiNP_082405.1, NM_028129.2
UniGeneiMm.38237

Genome annotation databases

EnsembliENSMUST00000084644; ENSMUSP00000081694; ENSMUSG00000030924
GeneIDi434234
UCSCiuc009jlw.1 mouse

Similar proteinsi

Entry informationi

Entry nameiD3Z3J7_MOUSE
AccessioniPrimary (citable) accession number: D3Z3J7
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: July 18, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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