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Protein
Submitted name:

Chromobox protein homolog 3

Gene

Cbx3

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

ReactomeiR-MMU-73777 RNA Polymerase I Chain Elongation
R-MMU-8953750 Transcriptional Regulation by E2F6

Names & Taxonomyi

Protein namesi
Submitted name:
Chromobox protein homolog 3Imported
Gene namesi
Name:Cbx3Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 6

Organism-specific databases

MGIiMGI:108515 Cbx3

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiD3Z1A9
PeptideAtlasiD3Z1A9
PRIDEiD3Z1A9

Expressioni

Gene expression databases

BgeeiENSMUSG00000029836 Expressed in 143 organ(s), highest expression level in thymus
ExpressionAtlasiD3Z1A9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliD3Z1A9
SMRiD3Z1A9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 71ChromoInterPro annotationAdd BLAST42

Phylogenomic databases

GeneTreeiENSGT00510000046310
HOGENOMiHOG000089963

Family and domain databases

CDDicd00024 CHROMO, 1 hit
InterProiView protein in InterPro
IPR038033 CBX3
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR023780 Chromo_domain
PANTHERiPTHR22812:SF110 PTHR22812:SF110, 1 hit
PfamiView protein in Pfam
PF00385 Chromo, 1 hit
SUPFAMiSSF54160 SSF54160, 1 hit
PROSITEiView protein in PROSITE
PS50013 CHROMO_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

D3Z1A9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASNKTTLQK MGKKQNGKSK KVEEAEPEEF VVEKVLDRRV VNGKVEYFLK
60 70
WKGFTELTNQ GALPEVSTLN E
Length:71
Mass (Da):8,086
Last modified:April 20, 2010 - v1
Checksum:iB987D784DC7CC977
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P23198CBX3_MOUSE
Chromobox protein homolog 3
Cbx3
183Annotation score:
Q9DCC5Q9DCC5_MOUSE
Cbx3 protein
Cbx3 mCG_119115
183Annotation score:
D3Z313D3Z313_MOUSE
Chromobox protein homolog 3
Cbx3
110Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC153877 Genomic DNA No translation available.
AC154011 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000114445; ENSMUSP00000110088; ENSMUSG00000029836

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC153877 Genomic DNA No translation available.
AC154011 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliD3Z1A9
SMRiD3Z1A9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiD3Z1A9
PeptideAtlasiD3Z1A9
PRIDEiD3Z1A9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000114445; ENSMUSP00000110088; ENSMUSG00000029836

Organism-specific databases

MGIiMGI:108515 Cbx3

Phylogenomic databases

GeneTreeiENSGT00510000046310
HOGENOMiHOG000089963

Enzyme and pathway databases

ReactomeiR-MMU-73777 RNA Polymerase I Chain Elongation
R-MMU-8953750 Transcriptional Regulation by E2F6

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000029836 Expressed in 143 organ(s), highest expression level in thymus
ExpressionAtlasiD3Z1A9 baseline and differential

Family and domain databases

CDDicd00024 CHROMO, 1 hit
InterProiView protein in InterPro
IPR038033 CBX3
IPR016197 Chromo-like_dom_sf
IPR000953 Chromo/chromo_shadow_dom
IPR023780 Chromo_domain
PANTHERiPTHR22812:SF110 PTHR22812:SF110, 1 hit
PfamiView protein in Pfam
PF00385 Chromo, 1 hit
SUPFAMiSSF54160 SSF54160, 1 hit
PROSITEiView protein in PROSITE
PS50013 CHROMO_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3Z1A9_MOUSE
AccessioniPrimary (citable) accession number: D3Z1A9
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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