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Protein
Submitted name:

Family with sequence similarity 84, member B

Gene

Fam84b

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Family with sequence similarity 84, member BImported
Gene namesi
Name:Fam84bImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 15

Organism-specific databases

MGIiMGI:3026924 Fam84b

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

MaxQBiD3YXJ5
PaxDbiD3YXJ5
PeptideAtlasiD3YXJ5
PRIDEiD3YXJ5

PTM databases

iPTMnetiD3YXJ5
PhosphoSitePlusiD3YXJ5

Expressioni

Gene expression databases

BgeeiENSMUSG00000072568 Expressed in 209 organ(s), highest expression level in small intestine
GenevisibleiD3YXJ5 MM

Interactioni

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000098200

Structurei

3D structure databases

ProteinModelPortaliD3YXJ5
SMRiD3YXJ5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini115 – 149LRATInterPro annotationAdd BLAST35
Domaini150 – 213LRATInterPro annotationAdd BLAST64

Phylogenomic databases

eggNOGiENOG410IGIG Eukaryota
ENOG410ZUU0 LUCA
GeneTreeiENSGT00390000013755
HOGENOMiHOG000293400
InParanoidiD3YXJ5
KOiK22810
OMAiYYRDECI
OrthoDBiEOG091G0CP2
PhylomeDBiD3YXJ5
TreeFamiTF330836

Family and domain databases

InterProiView protein in InterPro
IPR028815 FAM84B
IPR007053 LRAT-like_dom
PANTHERiPTHR13943:SF39 PTHR13943:SF39, 1 hit
PfamiView protein in Pfam
PF04970 LRAT, 2 hits

Sequencei

Sequence statusi: Complete.

D3YXJ5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGNQVEKLTH LSYKEVPTAD PTGVDRDDGP RIGVSYIFSN DDEDVEPQPP
60 70 80 90 100
PQGLDGGALS DSGDRPPLPP PQPYDPRQHE VECSVFYRDE CIYQKSFAPG
110 120 130 140 150
SAALSTYTPE NLLNKCSPGD LVEFVSQAQY PHWAVYVGNF QVVHLHRLEV
160 170 180 190 200
SNSFLTDASQ GRRGRVVNDL YRYKPLSPSA VVRNALAHVG AKERELSWRN
210 220 230 240 250
SESFAAWCRY GKREFKIGGE LRIGKQPYRL QIQLSAQRSH TLEFQSLEDL
260 270 280 290 300
IMEKRRNDQI GRAAVLQELA THLHPAEPDE GDSDATRTTP SPLRPPASGS
310
EEENGDSVVH
Length:310
Mass (Da):34,590
Last modified:April 20, 2010 - v1
Checksum:i7BACCD8418D69EC2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130823 Genomic DNA No translation available.
AC164597 Genomic DNA No translation available.
RefSeqiNP_001156398.1, NM_001162926.1
UniGeneiMm.411968

Genome annotation databases

EnsembliENSMUST00000100635; ENSMUSP00000098200; ENSMUSG00000072568
GeneIDi399603
KEGGimmu:399603
UCSCiuc007vya.2 mouse

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC130823 Genomic DNA No translation available.
AC164597 Genomic DNA No translation available.
RefSeqiNP_001156398.1, NM_001162926.1
UniGeneiMm.411968

3D structure databases

ProteinModelPortaliD3YXJ5
SMRiD3YXJ5
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10090.ENSMUSP00000098200

PTM databases

iPTMnetiD3YXJ5
PhosphoSitePlusiD3YXJ5

Proteomic databases

MaxQBiD3YXJ5
PaxDbiD3YXJ5
PeptideAtlasiD3YXJ5
PRIDEiD3YXJ5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000100635; ENSMUSP00000098200; ENSMUSG00000072568
GeneIDi399603
KEGGimmu:399603
UCSCiuc007vya.2 mouse

Organism-specific databases

CTDi157638
MGIiMGI:3026924 Fam84b

Phylogenomic databases

eggNOGiENOG410IGIG Eukaryota
ENOG410ZUU0 LUCA
GeneTreeiENSGT00390000013755
HOGENOMiHOG000293400
InParanoidiD3YXJ5
KOiK22810
OMAiYYRDECI
OrthoDBiEOG091G0CP2
PhylomeDBiD3YXJ5
TreeFamiTF330836

Miscellaneous databases

SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000072568 Expressed in 209 organ(s), highest expression level in small intestine
GenevisibleiD3YXJ5 MM

Family and domain databases

InterProiView protein in InterPro
IPR028815 FAM84B
IPR007053 LRAT-like_dom
PANTHERiPTHR13943:SF39 PTHR13943:SF39, 1 hit
PfamiView protein in Pfam
PF04970 LRAT, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD3YXJ5_MOUSE
AccessioniPrimary (citable) accession number: D3YXJ5
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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