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Protein
Submitted name:

Splicing factor 3A subunit 2

Gene

Sf3a2

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

ReactomeiR-MMU-72163 mRNA Splicing - Major Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
Splicing factor 3A subunit 2Imported
Submitted name:
Splicing factor 3a, subunit 2, isoform CRA_cImported
Gene namesi
Name:Sf3a2Imported
ORF Names:mCG_12094Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 10

Organism-specific databases

MGIiMGI:104912 Sf3a2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

BgeeiENSMUSG00000020211 Expressed in 289 organ(s), highest expression level in cardiac ventricle

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 84Matrin-typeInterPro annotationAdd BLAST31

Keywords - Domaini

Zinc-fingerSAAS annotation

Phylogenomic databases

eggNOGiKOG0227 Eukaryota
COG5246 LUCA
GeneTreeiENSGT00720000108823
HOGENOMiHOG000191688

Family and domain databases

InterProiView protein in InterPro
IPR000690 Matrin/U1-C_Znf_C2H2
IPR003604 Matrin/U1-like-C_Znf_C2H2
IPR031781 SF3A2_dom
IPR036236 Znf_C2H2_sf
PfamiView protein in Pfam
PF16835 SF3A2, 1 hit
SMARTiView protein in SMART
SM00451 ZnF_U1, 1 hit
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50171 ZF_MATRIN, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

D3YW09-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDFQHRPGGK TGSGGVASSS ESNRDRRERL RQLALETIDI NKDPYFMKNH
60 70 80 90 100
LGSYECKLCL TLHNNEGSYL AHTQGKKHQT NLARRAAKEA KEAPAQPAPE
110 120 130 140 150
KVKVEVKKFV KIGRPGYKVT KQRDTEMGQQ SLLFQIDYPE IAEGIMPRHR
160 170 180 190
FMSAYEQRIE PPDRRWQYLL MAAEPYETIA FKPLTFSLGA KPGD
Length:194
Mass (Da):22,135
Last modified:April 20, 2010 - v1
Checksum:iA393DF4F860F3182
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q62203SF3A2_MOUSE
Splicing factor 3A subunit 2
Sf3a2 Sap62
475Annotation score:
G3UVU2G3UVU2_MOUSE
Splicing factor 3A subunit 2
Sf3a2 mCG_12094
485Annotation score:
D3Z5A6D3Z5A6_MOUSE
Splicing factor 3A subunit 2
Sf3a2
67Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC166937 Genomic DNA No translation available.
CH466553 Genomic DNA Translation: EDL31498.1
RefSeqiXP_006513460.1, XM_006513397.2
UniGeneiMm.358633

Genome annotation databases

EnsembliENSMUST00000151928; ENSMUSP00000114164; ENSMUSG00000020211
GeneIDi20222

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC166937 Genomic DNA No translation available.
CH466553 Genomic DNA Translation: EDL31498.1
RefSeqiXP_006513460.1, XM_006513397.2
UniGeneiMm.358633

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000151928; ENSMUSP00000114164; ENSMUSG00000020211
GeneIDi20222

Organism-specific databases

CTDi8175
MGIiMGI:104912 Sf3a2

Phylogenomic databases

eggNOGiKOG0227 Eukaryota
COG5246 LUCA
GeneTreeiENSGT00720000108823
HOGENOMiHOG000191688

Enzyme and pathway databases

ReactomeiR-MMU-72163 mRNA Splicing - Major Pathway

Miscellaneous databases

ChiTaRSiSf3a2 mouse
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000020211 Expressed in 289 organ(s), highest expression level in cardiac ventricle

Family and domain databases

InterProiView protein in InterPro
IPR000690 Matrin/U1-C_Znf_C2H2
IPR003604 Matrin/U1-like-C_Znf_C2H2
IPR031781 SF3A2_dom
IPR036236 Znf_C2H2_sf
PfamiView protein in Pfam
PF16835 SF3A2, 1 hit
SMARTiView protein in SMART
SM00451 ZnF_U1, 1 hit
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS50171 ZF_MATRIN, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD3YW09_MOUSE
AccessioniPrimary (citable) accession number: D3YW09
Entry historyiIntegrated into UniProtKB/TrEMBL: April 20, 2010
Last sequence update: April 20, 2010
Last modified: September 12, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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