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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Gobs_3079

Organism
Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciGOBS526225:G1GH8-3042-MONOMER

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Gobs_3079Imported
OrganismiGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)Imported
Taxonomic identifieri526225 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaGeodermatophilalesGeodermatophilaceaeGeodermatophilus
Proteomesi
  • UP000001382 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi526225.Gobs_3079

Structurei

3D structure databases

ProteinModelPortaliD2S989
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 419AamyInterPro annotationAdd BLAST398

Phylogenomic databases

eggNOGiENOG4105CG3 Bacteria
COG0366 LUCA
HOGENOMiHOG000220639
OMAiFYGEEIG
OrthoDBiPOG091H07NZ

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR032091 Malt_amylase_C
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF16657 Malt_amylase_C, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 2 hits

Sequencei

Sequence statusi: Complete.

D2S989-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRITDTADLW WKNAVVYCLD VETYMDWNGD GCGDLPGLAQ RIDHLADLGV
60 70 80 90 100
TCLWLMPFYP TAERDDGYDI TDFYGVDRRL GTHGDLVEVI RTAQDRGMRV
110 120 130 140 150
IADLVVNHTS VEHPWFQRAR QSRDDPFHDF YVWRDDEPPD TSDQVVFPDQ
160 170 180 190 200
EKGVWTFNEP TGEWYLHKFY KEQPDLNVAN PRVRDEVAKV MGFWLQLGLS
210 220 230 240 250
GFRVDAVPFF LETAGTDGEA LPEPHEYLRD LRSVVGRRTG DGVLLGEVNL
260 270 280 290 300
PYEQQLEFFG GTDGDELTMQ FDFIGMQALY LSLARADAGP LATALAGRPA
310 320 330 340 350
LDPDSQWATF VRNHDELTLD KLTDDERQEV FAAFGPEERM QVYGRGLRRR
360 370 380 390 400
LPPMLDGDPR RVRMVYSLLF SLPGTPVLFY GEEIGMGEDL DAEGRLAVRT
410 420 430 440 450
PMQWTSGRNG GFSTADPDRL PGPVVDGGFA PEFVNVADQR RDEDSLLSFT
460 470 480 490 500
KLLIRRYRES PELGWGGFEL LEQPHREVLA HLCSWDDGAL VAVHNLGPEP
510 520 530 540 550
RTVPLMLPGC DAGHRLEDLL VTQTTPVGED GGVELTLDGY GYRWLRVVGP

DDRRLV
Length:556
Mass (Da):62,826
Last modified:March 2, 2010 - v1
Checksum:i632BAF88EEE63E29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001867 Genomic DNA Translation: ADB75689.1
RefSeqiWP_012949119.1, NC_013757.1

Genome annotation databases

EnsemblBacteriaiADB75689; ADB75689; Gobs_3079
KEGGigob:Gobs_3079

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001867 Genomic DNA Translation: ADB75689.1
RefSeqiWP_012949119.1, NC_013757.1

3D structure databases

ProteinModelPortaliD2S989
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi526225.Gobs_3079

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB75689; ADB75689; Gobs_3079
KEGGigob:Gobs_3079

Phylogenomic databases

eggNOGiENOG4105CG3 Bacteria
COG0366 LUCA
HOGENOMiHOG000220639
OMAiFYGEEIG
OrthoDBiPOG091H07NZ

Enzyme and pathway databases

BioCyciGOBS526225:G1GH8-3042-MONOMER

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
IPR032091 Malt_amylase_C
PfamiView protein in Pfam
PF00128 Alpha-amylase, 1 hit
PF16657 Malt_amylase_C, 1 hit
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SUPFAMiSSF51445 SSF51445, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiD2S989_GEOOG
AccessioniPrimary (citable) accession number: D2S989
Entry historyiIntegrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: February 28, 2018
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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