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Protein
Submitted name:

Coagulation factor 5/8 type domain protein

Gene

Slin_4540

Organism
Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-4483-MONOMER

Protein family/group databases

CAZyiGH43 Glycoside Hydrolase Family 43

Names & Taxonomyi

Protein namesi
Submitted name:
Coagulation factor 5/8 type domain proteinImported
Gene namesi
Ordered Locus Names:Slin_4540Imported
OrganismiSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)Imported
Taxonomic identifieri504472 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeSpirosoma
Proteomesi
  • UP000002028 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 34Sequence analysisAdd BLAST34
ChainiPRO_500303578135 – 616Sequence analysisAdd BLAST582

Interactioni

Protein-protein interaction databases

STRINGi504472.Slin_4540

Structurei

3D structure databases

ProteinModelPortaliD2QNI4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini357 – 519F5/8 type CInterPro annotationAdd BLAST163

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105F3A Bacteria
ENOG410XRV6 LUCA
HOGENOMiHOG000024172
OMAiWGSSNVY
OrthoDBiPOG091H0D4B

Family and domain databases

CDDicd00063 FN3, 1 hit
Gene3Di2.115.10.20, 1 hit
2.60.120.260, 1 hit
2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR000421 FA58C
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR008979 Galactose-bd-like_sf
IPR006710 Glyco_hydro_43
IPR023296 Glyco_hydro_beta-prop_sf
IPR013783 Ig-like_fold
PfamiView protein in Pfam
PF00754 F5_F8_type_C, 1 hit
PF04616 Glyco_hydro_43, 1 hit
SUPFAMiSSF49265 SSF49265, 1 hit
SSF49785 SSF49785, 1 hit
SSF75005 SSF75005, 1 hit
PROSITEiView protein in PROSITE
PS50022 FA58C_3, 1 hit

Sequencei

Sequence statusi: Complete.

D2QNI4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLNSGTIPNN IVRFLTLSLL SISLLVASYA PALAQQKTNR TYCNPMDISY
60 70 80 90 100
RYNFEQLNEK ISYRSGADPV IINHKKEYYL FVTIQGGWWH SKDMVNWKYI
110 120 130 140 150
VPDKWPMEDM CAPAALSVRD TLYLFQSTFE QRPIFYSTEP EKGKLKFFNR
160 170 180 190 200
WLPRLPKDIG PWDPALFHDD DTDKWYMYWG SSNVYPLFGA ELDKSRNLTY
210 220 230 240 250
AGNNPAASYK AMFWLDPYKH GWERFGPNHS DPFKPFTEGA WMTKHNGKYY
260 270 280 290 300
LQYGAPGTEY NVYGNGTYVG KDPLGPFEYA PYNPVAYKPG GFATGCGHGN
310 320 330 340 350
TFQDNFGNYW NTGTTWIGYN WGMERRIVMN PAGFDKDDQM FANTRFGDFP
360 370 380 390 400
HYLPDKTVST QNGMNTDALF TGWMLLSYRK PAVASSTLRA APTDTLSADR
410 420 430 440 450
TTDENPRTFW VAGQNKAGET LTLDLGAERD VRAVQVDYID YKQTIYDSDS
460 470 480 490 500
TVYTQFKILT SMDNKKWTVV ADLTKEPKRD RACAYVELEK PARARYVRYE
510 520 530 540 550
HVYVAGSHLA INAFRVFGNG LGKVPTTPAT LTAKRQKDQR NADLSWSKVP
560 570 580 590 600
GAVGYNIRWG IAPDKLYQNY QFWNDEPNTF ELRALNVGIP YYFAIEAFDE
610
NGVSVLSKVV SDGLGQ
Length:616
Mass (Da):70,392
Last modified:March 2, 2010 - v1
Checksum:i15CD97B478B6A9BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA Translation: ADB40520.1

Genome annotation databases

EnsemblBacteriaiADB40520; ADB40520; Slin_4540
KEGGisli:Slin_4540

Similar proteinsi

Entry informationi

Entry nameiD2QNI4_SPILD
AccessioniPrimary (citable) accession number: D2QNI4
Entry historyiIntegrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: November 22, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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