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Protein

Beta-xylanase

Gene
N/A
Organism
Cellulosilyticum ruminicola
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei309NucleophilePROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolism, Polysaccharide degradation, Xylan degradationImported

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
CBM2 Carbohydrate-Binding Module Family 2
GH10 Glycoside Hydrolase Family 10

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-xylanaseUniRule annotation (EC:3.2.1.8UniRule annotation)
OrganismiCellulosilyticum ruminicolaImported
Taxonomic identifieri425254 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeCellulosilyticum

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 30Sequence analysisAdd BLAST30
ChainiPRO_500303298031 – 667Beta-xylanaseSequence analysisAdd BLAST637

Structurei

3D structure databases

ProteinModelPortaliD2KFJ4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 380GH10InterPro annotationAdd BLAST352
Domaini566 – 667CBM2InterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the glycosyl hydrolase 10 (cellulase F) family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di2.60.40.290, 1 hit
InterProiView protein in InterPro
IPR001919 CBD2
IPR008965 CBM2/CBM3_carb-bd_dom_sf
IPR012291 CBM2_carb-bd_dom_sf
IPR019028 CBM_49
IPR001000 GH10
IPR031158 GH10_AS
IPR017853 Glycoside_hydrolase_SF
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF00553 CBM_2, 1 hit
PF00331 Glyco_hydro_10, 1 hit
PF14200 RicinB_lectin_2, 1 hit
PRINTSiPR00134 GLHYDRLASE10
SMARTiView protein in SMART
SM00637 CBD_II, 1 hit
SM01063 CBM49, 1 hit
SM00633 Glyco_10, 1 hit
SUPFAMiSSF49384 SSF49384, 1 hit
SSF50370 SSF50370, 1 hit
SSF51445 SSF51445, 2 hits
PROSITEiView protein in PROSITE
PS51173 CBM2, 1 hit
PS00591 GH10_1, 1 hit
PS51760 GH10_2, 1 hit

Sequencei

Sequence statusi: Fragment.

D2KFJ4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKKTMRNKLA TVVLAVTTTF VMSIGGVIYA ADATLINTYG NMFGKIGASA
60 70 80 90 100
EYSELCNSSV QNYFKGKYNS TTLGNHMKPD FILSNWSPKM ISVQQAKSMG
110 120 130 140 150
YYIPSNYKES TVPQLNFNEV DNALKICAEQ GLGLRGHTLL WHSQTPDWFF
160 170 180 190 200
RSGYNKNAGY VSQEVMDART EMYIKTVMNH VHKHQYGKVV YAWDVVNEYL
210 220 230 240 250
HASDTSGWVK IYGKPSPYAG FIKRAFRYAH EALVGLGLDK SVSLFYNDYN
260 270 280 290 300
TYLEADDVVK LINNINSDGK ICNGIGMQSH LGTDFPSVSF YAQALNKFAQ
310 320 330 340 350
AGFEIQITEL DVTNTSEDVQ SKYLYDLFTE IIKTKKSGGN ITGITLWGLH
360 370 380 390 400
DGATWIPGKN PLIFKDLNTP KKSYYSILQA YKDQVGAPTD QKDPTPTQPT
410 420 430 440 450
EVKPNANYAT LKDGWYYIKG VGSNKYLQVA DNKGGDAVNV EIGTGTGVAG
460 470 480 490 500
QKWYLTNTKD GYVTLKNGQG YTLDVVYGKD EDKTNIQTYT ANGMSAQEFK
510 520 530 540 550
LLPTSKSGEY GIVTKCSTDV RGLDVENKGT TDGSNVIQYG YYGAANQTWI
560 570 580 590 600
FEPCSTEPTQ EPTQEPTQQP SGNAVTGKVT SDWGSGAVAD ITVTNTTNSD
610 620 630 640 650
LNNWTVTFTS SRPITSVWNA TIVSQSGNTY TISGPTWQAG LAKGASYTFG
660
CQLDGSGDLT FSNVTLK
Length:667
Mass (Da):73,288
Last modified:February 9, 2010 - v1
Checksum:i35C24F9068A68887
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei667Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU211272 Genomic DNA Translation: ACZ98596.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU211272 Genomic DNA Translation: ACZ98596.1

3D structure databases

ProteinModelPortaliD2KFJ4
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM13 Carbohydrate-Binding Module Family 13
CBM2 Carbohydrate-Binding Module Family 2
GH10 Glycoside Hydrolase Family 10

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd00161 RICIN, 1 hit
Gene3Di2.60.40.290, 1 hit
InterProiView protein in InterPro
IPR001919 CBD2
IPR008965 CBM2/CBM3_carb-bd_dom_sf
IPR012291 CBM2_carb-bd_dom_sf
IPR019028 CBM_49
IPR001000 GH10
IPR031158 GH10_AS
IPR017853 Glycoside_hydrolase_SF
IPR035992 Ricin_B-like_lectins
IPR000772 Ricin_B_lectin
PfamiView protein in Pfam
PF00553 CBM_2, 1 hit
PF00331 Glyco_hydro_10, 1 hit
PF14200 RicinB_lectin_2, 1 hit
PRINTSiPR00134 GLHYDRLASE10
SMARTiView protein in SMART
SM00637 CBD_II, 1 hit
SM01063 CBM49, 1 hit
SM00633 Glyco_10, 1 hit
SUPFAMiSSF49384 SSF49384, 1 hit
SSF50370 SSF50370, 1 hit
SSF51445 SSF51445, 2 hits
PROSITEiView protein in PROSITE
PS51173 CBM2, 1 hit
PS00591 GH10_1, 1 hit
PS51760 GH10_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD2KFJ4_9FIRM
AccessioniPrimary (citable) accession number: D2KFJ4
Entry historyiIntegrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 20, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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