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Entry version 43 (26 Feb 2020)
Sequence version 1 (09 Feb 2010)
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Protein
Submitted name:

Uncharacterized protein

Gene

PANDA_000915

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:PANDA_000915Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiAiluropoda melanoleuca (Giant panda)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9646 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini51 – 93CAP-GlyInterPro annotationAdd BLAST43
Domaini205 – 247CAP-GlyInterPro annotationAdd BLAST43

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 23DisorderedSequence analysisAdd BLAST23
Regioni101 – 159DisorderedSequence analysisAdd BLAST59
Regioni282 – 310DisorderedSequence analysisAdd BLAST29
Regioni1269 – 1293DisorderedSequence analysisAdd BLAST25

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili323 – 350Sequence analysisAdd BLAST28
Coiled coili376 – 424Sequence analysisAdd BLAST49
Coiled coili450 – 470Sequence analysisAdd BLAST21
Coiled coili485 – 505Sequence analysisAdd BLAST21
Coiled coili522 – 549Sequence analysisAdd BLAST28
Coiled coili554 – 588Sequence analysisAdd BLAST35
Coiled coili597 – 617Sequence analysisAdd BLAST21
Coiled coili633 – 653Sequence analysisAdd BLAST21
Coiled coili676 – 728Sequence analysisAdd BLAST53
Coiled coili732 – 839Sequence analysisAdd BLAST108
Coiled coili847 – 909Sequence analysisAdd BLAST63
Coiled coili917 – 951Sequence analysisAdd BLAST35
Coiled coili960 – 1001Sequence analysisAdd BLAST42
Coiled coili1010 – 1165Sequence analysisAdd BLAST156
Coiled coili1169 – 1207Sequence analysisAdd BLAST39
Coiled coili1215 – 1235Sequence analysisAdd BLAST21
Coiled coili1296 – 1323Sequence analysisAdd BLAST28

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi105 – 159PolarSequence analysisAdd BLAST55

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG4568 Eukaryota
COG5244 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_001753_1_0_1

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.30.30.190, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036859 CAP-Gly_dom_sf
IPR000938 CAP-Gly_domain
IPR032108 CLIP1_ZNF

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01302 CAP_GLY, 2 hits
PF16641 CLIP1_ZNF, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01052 CAP_GLY, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF74924 SSF74924, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00845 CAP_GLY_1, 2 hits
PS50245 CAP_GLY_2, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Fragment.

D2GVX9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
AVVAPVERTI SSEKASNAPS SEAQEEFVDD FRVGERVWVN GNKPGFIQFL
60 70 80 90 100
GETQFAPGQW AGIVLDEPIG KNDGSVAGVR YFQCEPLKGI FTRPSKLTRK
110 120 130 140 150
VQAEDEANGL QTTPASRATS PLSSSAAPMM TPSPAAPSNI PHKSSQPTAK
160 170 180 190 200
EPSAASQISN LTKTASESIS NLSEAGSIKK GERELKIGDR VLVGGTKAGV
210 220 230 240 250
VRFLGETDFA KGEWCGVELD EPLGKNDGAV AGTRYFQCQP KYGLFAPVHK
260 270 280 290 300
VTKIGFPSTT PAKAKAAAVR RVIATTPASL KRSPSVSSLS SMSSVASSVS
310 320 330 340 350
SKPSRTGLLT ETSSRYARKI SGTTALQEAL KEKQQHIEQL LAERDLERAE
360 370 380 390 400
VAKATSHVGE VEQELALARD GHDQHVLELE AKMDQLRTMV EAADREKVEL
410 420 430 440 450
LNQLEEEKRK VEDLQFRVEE ESITKGDLEQ KSQISEDPEN TQTKLEHARI
460 470 480 490 500
KELEQSLLFE KTKADKLQRE LEDTRVATVS EKSRIMELEK DLALRAQEVA
510 520 530 540 550
ELRRRLESHK PVGDVDMSLS FLQEISSLQE KLEAAHADHQ REITSLKEQF
560 570 580 590 600
GAREETHQKE IKALQGATEK LSKENESLKS KLDHANKENS DVIALWKSKL
610 620 630 640 650
ETAIASHQQA MEELKVSFSK GVGTETAEFA ELKTQIEKIR LDYQHEIENL
660 670 680 690 700
QNKQDSERSA HAKELEALRG KLMAVITEKE SSLEALKAKL DKAEDQHLVE
710 720 730 740 750
MEDTLNKLQE AEIKVKDLEV LQAKCSEQTK VIDNFTSQLK ATEEKLLDLD
760 770 780 790 800
ALRKASSEGK SEIEKLRQQL EAAEKQIKNL EIEKNTESGK ASSITRELQG
810 820 830 840 850
KELTLNNLQE NLSEVSQVKE ALEKELQILK DKFADASEEA VSVQRSMQET
860 870 880 890 900
VNKLHQKEEQ FNALSTELEK LRENLTDMEA KCRERDEREE QLIKAKEKLE
910 920 930 940 950
NDIAEIMKMS GDNSSQLTKM NDELRLKERN IEELQLKLTK ANESASFLQK
960 970 980 990 1000
SMGEVTLQAE QSQQEAAKKH EEEKKELLKK LLDLEKKMEM SHNQCQDLKA
1010 1020 1030 1040 1050
RFEEASCETK AKHEATLQNL QKMLSDTEER LKAAREENSD LMQEMAELKK
1060 1070 1080 1090 1100
QADKAKAAQT AEDAMQIMEQ MTKEKSETLA SLEDTKQTNE KLQNELDTLK
1110 1120 1130 1140 1150
ENNLKNVEEL NKSKELLTVE NQKMEEFRKE IETLKQAAAQ KSQQLSALQE
1160 1170 1180 1190 1200
ENVKLAEELG RSRDEVTGHQ KLEEERSVLN NQLLEMKKRE SKLIKDADEE
1210 1220 1230 1240 1250
KASLQKSISI TSALLTEKDA ELEKLRNEVT VLRGESASAK SLHSVVQSLE
1260 1270 1280 1290 1300
SDKAKLELQV KNLELQLKEN RRQLGSSSGN TDTQAEEDER AQESQIDFLN
1310 1320 1330 1340 1350
SVIVDLQRKN QDLKMKVEMM SEAALNGNGD DLNNYDSDDQ EKQSKKKPRL
1360 1370 1380 1390 1400
FCDICDCFDL HETEDCPTQA QASEDPPHST HHGSRSEERP YCEICEVFGH
1410
WATHCNDDET F
Length:1,411
Mass (Da):158,573
Last modified:February 9, 2010 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6130647FA5C48780
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section is used for sequence fragments to indicate that the residue at the extremity of the sequence is not the actual terminal residue in the complete protein sequence.<p><a href='/help/non_ter' target='_top'>More...</a></p>Non-terminal residuei1Imported1
Non-terminal residuei1411Imported1

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
GL192354 Genomic DNA Translation: EFB19372.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL192354 Genomic DNA Translation: EFB19372.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Phylogenomic databases

eggNOGiKOG4568 Eukaryota
COG5244 LUCA
HOGENOMiCLU_001753_1_0_1

Family and domain databases

Gene3Di2.30.30.190, 2 hits
InterProiView protein in InterPro
IPR036859 CAP-Gly_dom_sf
IPR000938 CAP-Gly_domain
IPR032108 CLIP1_ZNF
PfamiView protein in Pfam
PF01302 CAP_GLY, 2 hits
PF16641 CLIP1_ZNF, 2 hits
SMARTiView protein in SMART
SM01052 CAP_GLY, 2 hits
SUPFAMiSSF74924 SSF74924, 2 hits
PROSITEiView protein in PROSITE
PS00845 CAP_GLY_1, 2 hits
PS50245 CAP_GLY_2, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiD2GVX9_AILME
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: D2GVX9
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: February 26, 2020
This is version 43 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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