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Protein
Submitted name:

NSP4

Gene
N/A
Organism
Human rotavirus A
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
NSP4Imported
OrganismiHuman rotavirus AImported
Taxonomic identifieri10941 [NCBI]
Taxonomic lineageiVirusesdsRNA virusesReoviridaeSedoreovirinaeRotavirusRotavirus A
Proteomesi
  • UP000106151 Componenti: Genome
  • UP000130022 Componenti: Genome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei29 – 46HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Structurei

3D structure databases

SMRiD0QB82
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili85 – 112Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR002107 Rotavirus_NSP4
PfamiView protein in Pfam
PF01452 Rota_NSP4, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002202 NSP4_rotavirus, 1 hit

Sequencei

Sequence statusi: Complete.

D0QB82-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKLADLNYT LSVITSMNDT LHSIIQDPGM AYFLYIASVL TVLFTLHKAS
60 70 80 90 100
IPTMKIALKT SKCSYKVIKY CIVTIINTLL KLAGYKEQVT TKDEIEQQMD
110 120 130 140 150
RIVKEMRRQL EMIDKLTTRE IEQVELLKRI HDNLITRPVD VIDMSKEFNQ
160 170
KNIKTLDEWE SGKNPYEPSE VTASM
Length:175
Mass (Da):20,237
Last modified:December 15, 2009 - v1
Checksum:iD86A4B990D0EB733
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FJ423133 Genomic RNA Translation: ACR22801.1
FJ423154 Genomic RNA Translation: ACR22824.1

Similar proteinsi

Entry informationi

Entry nameiD0QB82_9REOV
AccessioniPrimary (citable) accession number: D0QB82
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 18, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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