Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

tRNA pseudouridine synthase A

Gene

truA

Organism
Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.UniRule annotationSAAS annotation

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

Catalytic activityi

tRNA uridine(38-40) = tRNA pseudouridine(38-40).UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei55NucleophileUniRule annotation1
Binding sitei113SubstrateUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processtRNA processingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciHOCH502025:G1GGI-5470-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase AUniRule annotation (EC:5.4.99.12UniRule annotation)
Alternative name(s):
tRNA pseudouridine(38-40) synthaseUniRule annotation
tRNA pseudouridylate synthase IUniRule annotation
tRNA-uridine isomerase IUniRule annotation
Gene namesi
Name:truAUniRule annotation
Ordered Locus Names:Hoch_5141Imported
OrganismiHaliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2)Imported
Taxonomic identifieri502025 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesNannocystineaeKofleriaceaeHaliangium
Proteomesi
  • UP000001880 Componenti: Chromosome

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi502025.Hoch_5141

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 107PseudoU_synth_1InterPro annotationAdd BLAST96
Domaini146 – 249PseudoU_synth_1InterPro annotationAdd BLAST104

Sequence similaritiesi

Belongs to the tRNA pseudouridine synthase TruA family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105DI7 Bacteria
COG0101 LUCA
HOGENOMiHOG000248674
KOiK06173
OMAiFLYGMVR
OrthoDBiPOG091H010Q

Family and domain databases

Gene3Di3.30.70.660, 1 hit
HAMAPiMF_00171 TruA, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR001406 PsdUridine_synth_TruA
IPR020097 PsdUridine_synth_TruA_a/b_dom
IPR020095 PsdUridine_synth_TruA_C
PANTHERiPTHR11142 PTHR11142, 1 hit
PfamiView protein in Pfam
PF01416 PseudoU_synth_1, 2 hits
PIRSFiPIRSF001430 tRNA_psdUrid_synth, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
TIGRFAMsiTIGR00071 hisT_truA, 1 hit

Sequencei

Sequence statusi: Complete.

D0LWH9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTERTIRLV LEYDGTGLSG WQRQNNAPTV QAHVEDALSS MLGRAVQIVG
60 70 80 90 100
ASRTDAGVHA LGQVAHFRTG SSIPPHGFLR GLNGKLPPAI AVVACAEVRA
110 120 130 140 150
DFHARFDSRG KHYRYALHTR AARAPLLRER AWHCPRPLDL AAMERAAQAM
160 170 180 190 200
LGERDFQAFR ASGCTAKTSR RRVDRVALSR PAADLIHIDV YGNAFLRNMV
210 220 230 240 250
RIMAGTLVDV GLGRLAADEI SSILDSRDRT CAGRTAPAHG LTLVEVFYPA
260
ETPSTTTVPP SPQG
Length:264
Mass (Da):28,609
Last modified:December 15, 2009 - v1
Checksum:iAF5CFA21551B1E6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001804 Genomic DNA Translation: ACY17629.1

Genome annotation databases

EnsemblBacteriaiACY17629; ACY17629; Hoch_5141
KEGGihoh:Hoch_5141

Entry informationi

Entry nameiD0LWH9_HALO1
AccessioniPrimary (citable) accession number: D0LWH9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 15, 2009
Last sequence update: December 15, 2009
Last modified: July 18, 2018
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health