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Protein
Submitted name:

Sodium channel voltage-gated type V alpha polypeptide

Gene

Scn5a

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIon channelImported
Biological processIon transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Sodium channel voltage-gated type V alpha polypeptideImported
Gene namesi
Name:Scn5aImported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus

Organism-specific databases

MGIiMGI:98251 Scn5a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei106 – 125HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 101Na_trans_assocInterPro annotationAdd BLAST101

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR010526 Na_trans_assoc
PfamiView protein in Pfam
PF06512 Na_trans_assoc, 1 hit

Sequencei

Sequence statusi: Fragment.

D0ENM2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
VPIAVAESDT DDQEEDEENS LGTEEEESSK QTPEDSYSEG STADMTNTAD
60 70 80 90 100
LLEQIPDLGE DVKDPEDCFT EGCVRRCPCC MVDTTQAPGK VWWRLRKTCY
110 120 130
RIVEHSWFET FIIFMILLSS GALAFEDIYL EERK
Length:134
Mass (Da):15,259
Last modified:November 24, 2009 - v1
Checksum:i63F84CC92BA42087
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei134Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ861509 mRNA Translation: ACW83021.1
UniGeneiMm.103584

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ861509 mRNA Translation: ACW83021.1
UniGeneiMm.103584

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

MGIiMGI:98251 Scn5a

Miscellaneous databases

SOURCEiSearch...

Family and domain databases

InterProiView protein in InterPro
IPR010526 Na_trans_assoc
PfamiView protein in Pfam
PF06512 Na_trans_assoc, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiD0ENM2_MOUSE
AccessioniPrimary (citable) accession number: D0ENM2
Entry historyiIntegrated into UniProtKB/TrEMBL: November 24, 2009
Last sequence update: November 24, 2009
Last modified: October 25, 2017
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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