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Protein
Submitted name:

Single-stranded DNA-binding protein, mitochondrial

Gene

SSBP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Single-stranded DNA-binding protein, mitochondrialImported
Gene namesi
Name:SSBP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000106028.10
HGNCiHGNC:11317 SSBP1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000106028

PTM / Processingi

Proteomic databases

MaxQBiC9K0U8
PRIDEiC9K0U8

Expressioni

Gene expression databases

BgeeiENSG00000106028 Expressed in 236 organ(s), highest expression level in material anatomical entity
ExpressionAtlasiC9K0U8 baseline and differential

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1653 Eukaryota
COG0629 LUCA
GeneTreeiENSGT00390000002796
HOGENOMiHOG000106484

Family and domain databases

CDDicd04496 SSB_OBF, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000424 Primosome_PriB/ssb
IPR011344 ssDNA-bd
PANTHERiPTHR10302 PTHR10302, 1 hit
PTHR10302:SF0 PTHR10302:SF0, 1 hit
PfamiView protein in Pfam
PF00436 SSB, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00621 ssb, 1 hit
PROSITEiView protein in PROSITE
PS50935 SSB, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All

C9K0U8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFRRPVLQVL RQFVRHESET TTSLVLERSL NRVHLLGRVG QDPVLRQVEG
60 70 80 90 100
KNPVTIFSLA TNEMWRSGDS EVYQLGDVSQ KTTWHRISVF RPGLRDVAYQ
110 120
YVKKGSRIYL EGKIDYGEYM D
Length:121
Mass (Da):14,131
Last modified:November 3, 2009 - v1
Checksum:i47440F2AECD31FA6
GO

Computationally mapped potential isoform sequencesi

There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q04837SSBP_HUMAN
Single-stranded DNA-binding protein...
SSBP1 SSBP
148Annotation score:
E7EUY5E7EUY5_HUMAN
Single-stranded DNA-binding protein...
SSBP1
135Annotation score:
A0A0G2JLD8A0A0G2JLD8_HUMAN
Single-stranded DNA-binding protein...
SSBP1
134Annotation score:
C9J8J0C9J8J0_HUMAN
Single-stranded DNA-binding protein...
SSBP1
28Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei121Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004918 Genomic DNA No translation available.
AC004979 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000463093; ENSP00000419579; ENSG00000106028
ENST00000571709; ENSP00000461315; ENSG00000262771
UCSCiuc064irk.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004918 Genomic DNA No translation available.
AC004979 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiC9K0U8
PRIDEiC9K0U8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000463093; ENSP00000419579; ENSG00000106028
ENST00000571709; ENSP00000461315; ENSG00000262771
UCSCiuc064irk.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000106028.10
HGNCiHGNC:11317 SSBP1
OpenTargetsiENSG00000106028
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1653 Eukaryota
COG0629 LUCA
GeneTreeiENSGT00390000002796
HOGENOMiHOG000106484

Miscellaneous databases

ChiTaRSiSSBP1 human

Gene expression databases

BgeeiENSG00000106028 Expressed in 236 organ(s), highest expression level in material anatomical entity
ExpressionAtlasiC9K0U8 baseline and differential

Family and domain databases

CDDicd04496 SSB_OBF, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000424 Primosome_PriB/ssb
IPR011344 ssDNA-bd
PANTHERiPTHR10302 PTHR10302, 1 hit
PTHR10302:SF0 PTHR10302:SF0, 1 hit
PfamiView protein in Pfam
PF00436 SSB, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00621 ssb, 1 hit
PROSITEiView protein in PROSITE
PS50935 SSB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC9K0U8_HUMAN
AccessioniPrimary (citable) accession number: C9K0U8
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 10, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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