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Protein
Submitted name:

F-box-like/WD repeat-containing protein TBL1XR1

Gene

TBL1XR1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
F-box-like/WD repeat-containing protein TBL1XR1Imported
Gene namesi
Name:TBL1XR1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 3

Organism-specific databases

EuPathDBiHostDB:ENSG00000177565.15
HGNCiHGNC:29529 TBL1XR1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000177565

PTM / Processingi

Proteomic databases

PeptideAtlasiC9JY82
PRIDEiC9JY82

Expressioni

Gene expression databases

BgeeiENSG00000177565 Expressed in 210 organ(s), highest expression level in forebrain
ExpressionAtlasiC9JY82 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9JY82
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 36LisHInterPro annotationAdd BLAST33

Phylogenomic databases

eggNOGiENOG410IQU2 Eukaryota
COG2319 LUCA
GeneTreeiENSGT00890000139430

Family and domain databases

InterProiView protein in InterPro
IPR006594 LisH
PfamiView protein in Pfam
PF08513 LisH, 1 hit
SMARTiView protein in SMART
SM00667 LisH, 1 hit
PROSITEiView protein in PROSITE
PS50896 LISH, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 19 potential isoforms that are computationally mapped.Show allAlign All

C9JY82-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSISSDEVNF LVYRYLQESG FSHSAFTFGI ESHISQSNIN GALVPPAALI
60 70
SIIQKGLQYV EAEVSINEDG TL
Length:72
Mass (Da):7,835
Last modified:May 27, 2015 - v2
Checksum:iEC0596284A68416B
GO

Computationally mapped potential isoform sequencesi

There are 19 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9BZK7TBL1R_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1 IRA1, TBLR1
514Annotation score:
A0A0D9SF63A0A0D9SF63_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
474Annotation score:
A0A1B0GVH3A0A1B0GVH3_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
271Annotation score:
A0A0D9SFI2A0A0D9SFI2_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
67Annotation score:
C9JCW4C9JCW4_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
33Annotation score:
C9J7E1C9J7E1_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
120Annotation score:
C9JEC9C9JEC9_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
81Annotation score:
C9J903C9J903_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
96Annotation score:
C9JTW8C9JTW8_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
61Annotation score:
C9IYU9C9IYU9_HUMAN
F-box-like/WD repeat-containing pro...
TBL1XR1
145Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei72Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC023235 Genomic DNA No translation available.
AC078799 Genomic DNA No translation available.
AC117465 Genomic DNA No translation available.
KF457713 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000422442; ENSP00000387849; ENSG00000177565
UCSCiuc062qcj.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC023235 Genomic DNA No translation available.
AC078799 Genomic DNA No translation available.
AC117465 Genomic DNA No translation available.
KF457713 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliC9JY82
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiC9JY82
PRIDEiC9JY82

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000422442; ENSP00000387849; ENSG00000177565
UCSCiuc062qcj.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000177565.15
HGNCiHGNC:29529 TBL1XR1
OpenTargetsiENSG00000177565
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IQU2 Eukaryota
COG2319 LUCA
GeneTreeiENSGT00890000139430

Miscellaneous databases

ChiTaRSiTBL1XR1 human

Gene expression databases

BgeeiENSG00000177565 Expressed in 210 organ(s), highest expression level in forebrain
ExpressionAtlasiC9JY82 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR006594 LisH
PfamiView protein in Pfam
PF08513 LisH, 1 hit
SMARTiView protein in SMART
SM00667 LisH, 1 hit
PROSITEiView protein in PROSITE
PS50896 LISH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC9JY82_HUMAN
AccessioniPrimary (citable) accession number: C9JY82
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: May 27, 2015
Last modified: September 12, 2018
This is version 67 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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