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Protein
Submitted name:

Plexin domain-containing protein 1

Gene

PLXDC1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Plexin domain-containing protein 1Imported
Gene namesi
Name:PLXDC1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

EuPathDBiHostDB:ENSG00000161381.13
HGNCiHGNC:20945 PLXDC1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000161381

PTM / Processingi

Proteomic databases

PeptideAtlasiC9JWQ3
PRIDEiC9JWQ3

Expressioni

Gene expression databases

BgeeiENSG00000161381 Expressed in 216 organ(s), highest expression level in tendon
ExpressionAtlasiC9JWQ3 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9JWQ3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3848 Eukaryota
ENOG410Y7ZQ LUCA
GeneTreeiENSGT00440000033408
HOGENOMiHOG000234044

Family and domain databases

InterProiView protein in InterPro
IPR031152 PLXDC
IPR031153 PLXDC1
PANTHERiPTHR13055 PTHR13055, 1 hit
PTHR13055:SF10 PTHR13055:SF10, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.Show allAlign All

C9JWQ3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDTLPDNRTR VVEDNHSYYV SRLYGPSEPH SRELWVDVAE ANRSQVKIHT
60 70 80 90 100
ILSNTHRQAS RVVLSFDFPF YGHPLRQITI ATGGFIFMGD VIHRMLTATQ
110 120 130 140 150
YVAPLMANFN PGYSDNSTVV YFDNGTVFVV QWDHVYLQGW EDKGSFTFQA
160 170 180 190 200
ALHHDGRIVF AYKEIPMSVP EISSSQHPVK TGLSDAFMIL NPSPDVPESR
210 220
RRSIFEYHRI ELDPSKVTSM SA
Length:222
Mass (Da):25,311
Last modified:November 3, 2009 - v1
Checksum:i538789349DD2F2AD
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8IUK5PLDX1_HUMAN
Plexin domain-containing protein 1
PLXDC1 TEM3, TEM7
500Annotation score:
B4E173B4E173_HUMAN
cDNA FLJ58221, highly similar to Pl...
PLXDC1
460Annotation score:
C9JCL2C9JCL2_HUMAN
Plexin domain-containing protein 1
PLXDC1
124Annotation score:
J3QR40J3QR40_HUMAN
Plexin domain-containing protein 1
PLXDC1
98Annotation score:
J3QRR7J3QRR7_HUMAN
Plexin domain-containing protein 1
PLXDC1
182Annotation score:
J3KS04J3KS04_HUMAN
Plexin domain-containing protein 1
PLXDC1
99Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei222Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004408 Genomic DNA No translation available.
AC091178 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000441877; ENSP00000393227; ENSG00000161381
UCSCiuc060epi.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC004408 Genomic DNA No translation available.
AC091178 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliC9JWQ3
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiC9JWQ3
PRIDEiC9JWQ3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000441877; ENSP00000393227; ENSG00000161381
UCSCiuc060epi.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000161381.13
HGNCiHGNC:20945 PLXDC1
OpenTargetsiENSG00000161381
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG3848 Eukaryota
ENOG410Y7ZQ LUCA
GeneTreeiENSGT00440000033408
HOGENOMiHOG000234044

Gene expression databases

BgeeiENSG00000161381 Expressed in 216 organ(s), highest expression level in tendon
ExpressionAtlasiC9JWQ3 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR031152 PLXDC
IPR031153 PLXDC1
PANTHERiPTHR13055 PTHR13055, 1 hit
PTHR13055:SF10 PTHR13055:SF10, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC9JWQ3_HUMAN
AccessioniPrimary (citable) accession number: C9JWQ3
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 12, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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