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Protein
Submitted name:

EARP and GARP complex-interacting protein 1

Gene

EIPR1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

SignaLinkiC9JVR6

Names & Taxonomyi

Protein namesi
Submitted name:
EARP and GARP complex-interacting protein 1Imported
Gene namesi
Name:EIPR1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 2

Organism-specific databases

EuPathDBiHostDB:ENSG00000032389.12
HGNCiHGNC:12383 EIPR1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000032389

PTM / Processingi

Proteomic databases

MaxQBiC9JVR6
PeptideAtlasiC9JVR6
PRIDEiC9JVR6

Expressioni

Gene expression databases

BgeeiENSG00000032389 Expressed in 197 organ(s), highest expression level in prostate gland
ExpressionAtlasiC9JVR6 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliC9JVR6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini50 – 159WD_REPEATS_REGIONInterPro annotationAdd BLAST110
Repeati73 – 109WDPROSITE-ProRule annotationAdd BLAST37

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1007 Eukaryota
ENOG410XRIE LUCA
GeneTreeiENSGT00730000111137
HOGENOMiHOG000264967

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 2 hits
SMARTiView protein in SMART
SM00320 WD40, 3 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

C9JVR6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDDAPVIYG LEFQESSSQA VLASSASLEG KGQLKFTSGR WSPHHNCTQV
60 70 80 90 100
ATANDTTLRG WDTRSMSQIY CIENAHGQLV RDLDFNPNKQ YYLASCGDDC
110 120 130 140 150
KVKFWDTRNV TEPVKTLEEH SHWVWNVRYN HSHDQLVLTG SSDSRVILSN
160 170
MVSISSEPFG HLVDDDDISD QEDHRSEE
Length:178
Mass (Da):20,179
Last modified:November 3, 2009 - v1
Checksum:i3B172C6B74A64B22
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q53HC9EIPR1_HUMAN
EARP and GARP complex-interacting p...
EIPR1 TSSC1
387Annotation score:
A8MUM1A8MUM1_HUMAN
EARP and GARP complex-interacting p...
EIPR1
414Annotation score:
D3YTH5D3YTH5_HUMAN
EARP and GARP complex-interacting p...
EIPR1
314Annotation score:
C9J0U9C9J0U9_HUMAN
EARP and GARP complex-interacting p...
EIPR1
155Annotation score:
F8WB12F8WB12_HUMAN
EARP and GARP complex-interacting p...
EIPR1
87Annotation score:
F8WDX0F8WDX0_HUMAN
EARP and GARP complex-interacting p...
EIPR1
58Annotation score:
F8WDS8F8WDS8_HUMAN
EARP and GARP complex-interacting p...
EIPR1
132Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei178Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC019118 Genomic DNA No translation available.
AC073502 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000441271; ENSP00000393350; ENSG00000032389
UCSCiuc061gdk.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC019118 Genomic DNA No translation available.
AC073502 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliC9JVR6
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiC9JVR6
PeptideAtlasiC9JVR6
PRIDEiC9JVR6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000441271; ENSP00000393350; ENSG00000032389
UCSCiuc061gdk.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000032389.12
HGNCiHGNC:12383 EIPR1
OpenTargetsiENSG00000032389
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1007 Eukaryota
ENOG410XRIE LUCA
GeneTreeiENSGT00730000111137
HOGENOMiHOG000264967

Enzyme and pathway databases

SignaLinkiC9JVR6

Gene expression databases

BgeeiENSG00000032389 Expressed in 197 organ(s), highest expression level in prostate gland
ExpressionAtlasiC9JVR6 baseline and differential

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 2 hits
SMARTiView protein in SMART
SM00320 WD40, 3 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiC9JVR6_HUMAN
AccessioniPrimary (citable) accession number: C9JVR6
Entry historyiIntegrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 10, 2018
This is version 59 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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